Shewanella avicenniae: JYB87_01880
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Entry
JYB87_01880 CDS
T07845
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
savi
Shewanella avicenniae
Pathway
savi00230
Purine metabolism
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
Module
savi_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
JYB87_01880 (purD)
Enzymes [BR:
savi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
JYB87_01880 (purD)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
RimK
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
QSX34026
UniProt:
A0ABX7QTM5
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All DBs
Position
complement(431906..433207)
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AA seq
433 aa
AA seq
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MKVLVIGGGGREHALSWKAAQNNDVEVVFVAPGNAGTAHEPKLQNIDISATDVAALLAFA
QEKQVELTIVGPEAPLVIGVVDAFRAANMNIFGPTQAAAQLEGSKAFTKDFLARHNIPTA
AYKNLTEIAPAKAYAAELAAETGFPVVIKADGLAAGKGVIIAQNQAEADAAIDDMLAGNK
FGEAGSRVVIEEFLKGEEASFIVMVDGKNILPMATSQDHKARDNADNGPNTGGMGAYSPA
PVVTQEIHDWVVANVIRPTVDGMAAEGNVYTGFLYAGLMIAPDGTAKVLEYNCRFGDPET
QPIMMRLKSDLVALCLAGCKGELDQVTAEYDDRAAVGVVLAAGGYPDEYRQGDVIEGLSL
GDNNAKVFHAGTKLDGEHVVTAGGRVLCATALGNTVTEAQKTAYALVDEIHWDDVYFRTD
IGYRAIAREQQAK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctcgttattggtggtggtggtcgtgaacacgcattgtcgtggaaagcggcg
caaaacaacgatgtggaagtggtatttgttgctccaggtaatgcgggtaccgcccacgag
cctaaattgcaaaacatcgacattagcgcaactgacgtcgcggcactgttagcgtttgcc
caagaaaaacaagtggaactgaccattgttggcccagaagcgccactggtgatcggcgta
gtcgatgcgttccgcgcggccaatatgaacatctttggcccaacccaagcagctgcgcaa
ttagaaggctctaaagcctttaccaaagactttttagcacgtcacaatattccaaccgct
gcttataaaaacctgactgaaatcgccccagccaaggcctacgcggcagagttggcggca
gaaacaggttttccggtagtgatcaaagctgacggcttagcagccggtaagggcgtgatc
atcgcgcaaaaccaagccgaagcagatgccgcaatcgacgacatgctggcgggtaacaag
tttggcgaagccggttcgcgtgtcgttatcgaagagttccttaaaggcgaagaagctagc
ttcatcgtgatggtcgatggcaaaaacattctgccaatggccaccagccaagaccataaa
gcacgcgataacgctgacaatggccctaacactggcggtatgggtgcttactcacctgca
ccagtggtcacccaagagatccacgattgggtggtggctaacgtgatccgtccaaccgtg
gatggtatggctgctgaaggcaacgtgtatactggttttctctatgccggcttgatgatt
gcaccagatggcactgcaaaagtactggaatacaactgccgctttggcgacccagaaacc
caacctatcatgatgcgtttgaaatctgacttggtggcactgtgtttggcgggctgcaaa
ggcgagttggatcaagtaaccgcggaatacgatgaccgcgctgctgttggtgtggtattg
gctgcgggtggttatcctgatgaatatcgccaaggcgatgtgattgaaggcctgtcactc
ggtgataacaacgctaaagtgttccacgccggcactaaacttgacggcgaacacgtagtg
actgcaggcggccgcgtactgtgtgccacggcactgggtaacacagtgaccgaagcacaa
aaaaccgcttatgcactggtggatgaaatccattgggacgatgtctacttccgtaccgat
atcggctaccgtgccattgcccgcgagcaacaagcgaaatag
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