Shewanella avicenniae: JYB87_02085
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Entry
JYB87_02085 CDS
T07845
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
savi
Shewanella avicenniae
Pathway
savi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB87_02085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_02085
02044 Secretion system [BR:
savi02044
]
JYB87_02085
Transporters [BR:
savi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
JYB87_02085
Secretion system [BR:
savi02044
]
Type I secretion system
Adhesin protein transporter
JYB87_02085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_29
AAA
AAA_13
AAA_22
AAA_23
DUF87
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QSX35382
LinkDB
All DBs
Position
complement(474164..476248)
Genome browser
AA seq
694 aa
AA seq
DB search
MTEYYGSPCSVESLVAGLPLSTAVLPAELFPQAASRAGLAAKLMRKGLNEILAIQLPCVL
LLKDKKACILRELDFDKHTAVIQLPETGGEQRLSIEELEAIYVGYLFLVKQQYRGDMGFD
VYQHDHSSHWLLQTLRDAAPIYRDALIASVLVNIFALVSPLFVMNVYDKVVPNLAFESLW
VLAAGAGIAYFFDFVMRQLRAYLIDIAGKKIDIIVSSRLFYKAIGLPLEKRSSSVGGMAR
QLSEFDSIRDFLTSTTITTLVDLPFAMLFVVIIYLVAGDLAVIPVIAGVTILIFTLIIQP
RLKRAIEESNKFASLKHGHLIESLSALESIKSYGAEGLIQKAWQQMIGHTANWQLKTKKL
SNAVSHFATFIVQATTVFVVILGVYRVADNAISMGGIIAAVMLSSRAVSPMAQLANLMTR
ANQMISALRQLDGIMTQEDEFENKGHLVTKQRLMGKIEADNITFSYPGTEQPVLHPLSLH
IQPGEKIAIIGRNGSGKSTLAKLLVGLYQPASGSLRYDGVDSAQIHPSDLRRNFGYLAQD
VTLFHGTVRDNILFGTRSVTEHQLMRAVQLSGVNLFTDMEAEGLDRQVGEKGESLSRGQR
QTVALARAILNDPPVLLMDEPTASLDARAEKQFMRSMGHVSKDRTLIIITHKMDLLQLVN
RIIVLDRGRILADGPKNKVLEMLNQGLMAGGNRG
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtattacggtagtccatgctccgttgaatctttggtagcaggcctgccatta
tcaacagccgtattgccagccgaactgtttccgcaagccgcgtctcgggcaggtttagcc
gctaaactgatgcgtaaagggctcaatgaaatcttagcgattcaactaccctgcgtgttg
ttgctgaaagataagaaagcctgcatcttacgtgagctggattttgataagcatacggca
gtgattcaacttccagaaacgggtggtgaacaacggctatcaattgaagaacttgaagcc
atctatgtcggctatctgtttttggttaagcagcagtaccgcggtgatatgggctttgat
gtctaccaacatgaccatagctcccattggcttttacagacattacgagatgccgcgccc
atctatcgggatgcgttaattgcctcggtgctagttaatatctttgcgcttgtgtcgcca
ttatttgtgatgaatgtgtacgacaaagtggtgcccaatctagcatttgaatctttatgg
gtactggctgctggcgctggcattgcctactttttcgattttgtcatgcgacaactgcgt
gcttatctgattgatattgcaggtaagaaaatcgacattattgtgtcatcacggctgttt
tataaagccattggtctgccgttagagaaacgttctagcagtgtcggcggcatggcaagg
cagttgagtgaatttgacagcattcgtgactttttaacctcaacgacgattaccacatta
gtcgacttaccgtttgcgatgctatttgtggtcattatctatttggttgctggtgatctg
gcggtaattccggtgatcgctggggtaacaattcttatatttaccctcattattcaaccg
cgcctcaaacgcgctattgaagagagtaataagttcgccagcttgaagcatggccatttg
attgagagtttgtcagcgcttgaatcgataaaaagctatggcgccgaaggcctgatccaa
aaagcgtggcaacagatgattggccacaccgcaaactggcagctgaagaccaaaaagcta
tcaaatgctgtatcgcactttgctacctttattgtgcaagcaacgacagtatttgtggtg
atactcggggtttatcgcgttgctgataacgcaatctctatgggcggcatcattgcagcg
gtgatgctttcaagccgtgcagtgtcaccgatggcgcaattggcgaacctaatgacacgc
gccaaccagatgattagcgccttacgtcagttagacggcatcatgacccaagaagatgag
tttgaaaataaaggccatctggtcactaaacaacggctgatggggaaaattgaagctgat
aacatcaccttcagctacccaggcaccgagcaaccggtgttacatccgctgtcgttgcat
attcagcccggcgaaaaaattgcaattattggtagaaatggtagcggtaagagtacctta
gcaaaattgttagtgggtctttaccagcccgccagcggaagtctgcgctatgacggtgtc
gactcagcgcagatccatccaagcgacttacggcgcaactttggttatctcgcccaagac
gtgaccctgtttcacggaacagtacgcgataacattctatttggtacacgctcggtgacg
gaacaccaattgatgcgcgcagtacagctgtcgggcgtgaacctgttcaccgatatggaa
gcggaaggcctagaccgtcaagtcggtgaaaaaggcgaatcgttgtctcgtggccaacgt
cagaccgtcgcattagcccgagcgattttgaacgacccgccggtgttattgatggatgaa
ccaaccgccagtctcgatgcccgcgctgaaaaacaatttatgcgctcaatgggacatgtt
agcaaagaccgcaccctcatcattatcacgcataagatggatctgctgcagttggtaaat
cggattattgtgttggatcgcggccgtatcctagccgatggtccgaaaaataaggtattg
gagatgttaaatcaggggctgatggcaggaggtaatcgtggctaa
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