Shewanella avicenniae: JYB87_02135 Help Entry JYB87_02135       CDS       T07845                                  Symbol dapF Name (GenBank) diaminopimelate epimerase   KO K01778   diaminopimelate epimerase [EC:5.1.1.7] Organism savi  Shewanella avicenniae Pathway savi00300   Lysine biosynthesis savi00470   D-Amino acid metabolism savi01100   Metabolic pathways savi01110   Biosynthesis of secondary metabolites savi01120   Microbial metabolism in diverse environments savi01230   Biosynthesis of amino acids Module savi_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine Brite KEGG Orthology (KO) [BR:savi00001]  09100 Metabolism   09105 Amino acid metabolism    00300 Lysine biosynthesis     JYB87_02135 (dapF)   09106 Metabolism of other amino acids    00470 D-Amino acid metabolism     JYB87_02135 (dapF) Enzymes [BR:savi01000]  5. Isomerases   5.1  Racemases and epimerases    5.1.1  Acting on amino acids and derivatives     5.1.1.7  diaminopimelate epimerase      JYB87_02135 (dapF) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DAP_epimerase PhzC-PhzF Motif Other DBs NCBI-ProteinID:  QSX34067 UniProt:  A0ABX7QRI3 LinkDB All DBs Position 503674..504501 Genome browser AA seq 275 aa AA seqDB search MIQFTKMHGLGNDFMVVDAVTQNVFFSPEQIRRLADRNFGVGFDQLLLVEPPYDPELDFH YRIFNADGSEVEQCGNGARCFARFVKNKGLTQKYKIRVSTSAGKMLLKLEKDGTVTVNMG VPILEPNSVPFKAKKAEKTYLLQAGSQNFLCGVVSMGNPHCVIQVDDVGNTDVDTLGSLL TNHERFPNGVNVGFMQVVSPEHVKLRVYERGAAETLACGSGACAAAAVGQLQGKLAGTVK VDLPGGSLTISWEGEGKPLYMTGPAEHVYDGQIQL NT seq 828 nt NT seq  +upstreamnt  +downstreamnt ttgattcagttcactaaaatgcatgggttaggcaacgactttatggttgtagatgccgtc acccaaaatgtgtttttttcaccagagcagatccgtcgcttggcggaccgcaattttggc gtgggctttgatcagttattgttggtcgagccgccgtacgatcctgaactcgattttcac tatcgtatttttaatgccgatggcagcgaagtcgagcagtgcggcaatggtgcccgttgt tttgcgcgctttgtgaaaaacaaaggcttaacccaaaagtacaagattcgcgtgagtact tctgcgggaaaaatgctgttaaaactggaaaaagatggcaccgtaaccgtgaatatgggc gtgccaatcttagaaccaaattctgtgccgtttaaagccaaaaaagcggagaagacctac ctgctgcaggcgggcagtcaaaactttctctgtggtgtggtttccatgggaaatcctcat tgtgtgattcaagtagacgacgttggcaatacagatgtagatactttggggtcgctgctg actaaccacgagcgttttccaaatggtgtcaacgtcggctttatgcaagtggtgtcgcca gagcatgtcaaactgcgcgtctatgaacgtggcgcggcggaaaccttagcgtgtggcagt ggcgcatgcgccgccgcagccgttggccaattacaaggtaagttggcggggacagtgaag gtagatttacccggtggttcgttgacgatttcgtgggaaggggaaggaaaaccgctttac atgaccggcccagctgagcatgtatatgatggccaaatacaactatga

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