Shewanella avicenniae: JYB87_02300
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Entry
JYB87_02300 CDS
T07845
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
savi03019
]
JYB87_02300 (rapZ)
Messenger RNA biogenesis [BR:
savi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JYB87_02300 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QSX34098
LinkDB
All DBs
Position
complement(533244..534098)
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AA seq
284 aa
AA seq
DB search
MKLAIVSGRSGSGKSVALRVLEDMGYYCVDNLPLQMIGDLLVNLRGSNEFVAISVDVRNL
PNQDKLLESQLAKLPEGTEVISFFLNASDKVLIKRYSETRRLHPLSKRHKSLKEAIEEEG
ELLEPISQLMDHYLDTSTSNIYELSDTVREILLGTSTKELVINFESFGFKHGVPTEADFV
FDVRFLPNPHWEVSLRPYTGLDEPVQEFLSRQPLVNKLIWQIENLFETWLPHLERNNRSY
LTIAIGCTGGQHRSVYVADQLAKRFSSSKHRVQAKHRELQSGKS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggccatagtctccggtcgttcaggttcaggaaaatctgtagccctgcgcgta
ttagaggatatgggctattactgtgttgacaacttgccattacagatgattggcgatctg
ctagtaaatctgcgaggcagcaatgagttcgtcgctatcagtgttgacgtgcgcaactta
cccaaccaagataagttacttgaaagtcagcttgcgaaactccccgaaggcacagaggtc
atcagttttttcctcaatgcatccgacaaagtattaatcaagcgctatagtgaaacccgc
cgtttacatccgctctccaagcgtcataaatcgttaaaagaggcgattgaagaggaaggt
gaactgctagagcctatctcgcagttgatggatcattatcttgatacctcaacttccaac
atctatgaattaagcgacactgtgcgtgaaattctgctgggcacctctaccaaagaactg
gtaattaactttgagtcgtttgggtttaaacatggggtgccaaccgaagctgattttgtg
tttgatgtcaggttcctaccgaacccgcactgggaagtcagtcttaggccatacactggc
ttagatgaaccggtgcaggagtttttgtcacgccaaccgctagtcaataagctcatctgg
cagattgaaaacctgtttgagacttggttgccgcatcttgaacgcaataaccgcagttat
ctcaccatcgctattggttgtactggtgggcaacatcgttcagtgtatgtagcagatcaa
cttgctaaacgctttagcagtagcaaacatcgcgtgcaagcgaagcatcgggagttacaa
agtggcaaaagttga
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