KEGG   Shewanella avicenniae: JYB87_02320
Entry
JYB87_02320       CDS       T07845                                 
Symbol
lptB
Name
(GenBank) LPS export ABC transporter ATP-binding protein
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
savi  Shewanella avicenniae
Pathway
savi02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:savi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    JYB87_02320 (lptB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:savi02000]
    JYB87_02320 (lptB)
Enzymes [BR:savi01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     JYB87_02320 (lptB)
Transporters [BR:savi02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    JYB87_02320 (lptB)
 Other transporters
  Pores ion channels [TC:1]
   JYB87_02320 (lptB)
SSDB
Motif
Pfam: ABC_tran BCA_ABC_TP_C AAA_21 DO-GTPase2 nSTAND3 RecA AAA_23 T2SSE AAA_22 AAA AAA_30 Zeta_toxin
Other DBs
NCBI-ProteinID: QSX34102
LinkDB
Position
complement(536422..537150)
AA seq 242 aa
MTSVLKATNLAKSYKKRSVVKDVSLQVNTGQIVGLLGPNGAGKTTTFYMVVGLVQSDHGR
IFIDQDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLEVRKGLSNEEREAILE
QLLEEFHITHIRDSLGMALSGGERRRVEIARALAADPKFILLDEPFAGVDPISVIDIKKI
IEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGQLIAEGTPAEILDNQQVRAVYLGEQF
RL
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaccagcgttttaaaagcgaccaatctggccaagagctataaaaaacgttcggtagta
aaagatgttagcttacaggtaaacaccggacagatcgttggtttgctcggtcctaacggt
gcgggcaaaaccaccaccttctacatggtggtcggcttagtacagagtgaccatggccgt
atttttattgatcaagatgatctgaccttagatccaatgcacctgcgggcgcgtaaaggg
attggttatctgccgcaagaggcgagtatttttcgcaaactctcagtgcgcgataacatt
atggccgttcttgaagtccgcaaaggattaagcaacgaagaacgcgaagccattcttgaa
cagctgctcgaagagtttcatatcacccacatccgtgacagcttggggatggcgttatcg
ggtggagaacggcgccgcgttgagatagcacgcgcgttagcggctgatccaaaattcatt
ttattggacgaaccttttgcgggcgtagatccaatttctgttatcgatatcaagaaaatc
atcgaacaactcaagtctcgaggactgggtgtcttgattaccgatcataacgtgcgcgaa
actctggatgtgtgcgaacacgcctacatcgtcagccatgggcagctgattgcagaaggc
acacccgccgagatcctcgacaaccaacaggtgcgagcagtgtacttaggggaacaattc
aggctatag

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