Shewanella avicenniae: JYB87_02420
Help
Entry
JYB87_02420 CDS
T07845
Name
(GenBank) response regulator
KO
K11527
two-component system, sensor histidine kinase and response regulator [EC:
2.7.13.3
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
savi01001
]
JYB87_02420
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
savi02022
]
JYB87_02420
Enzymes [BR:
savi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JYB87_02420
Protein kinases [BR:
savi01001
]
Histidine kinases
Other
JYB87_02420
Two-component system [BR:
savi02022
]
Other families
Unclassified
JYB87_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
PAS_3
PAS_4
PAS
PAS_9
PAS_8
dCache_1
cREC_REC
DUF4727
Motif
Other DBs
NCBI-ProteinID:
QSX34122
LinkDB
All DBs
Position
557741..561433
Genome browser
AA seq
1230 aa
AA seq
DB search
MKSTEPDLQLKSPIQKNYNRAVFYTYIGVLVLASLTAWLYFERQKNEQMVQREEQIDRHV
MQIDLLLESSIRAVKSLRNIAVDHLRLAEDVRKDRLPQYQKFNEQGQYFTLEPTYANSGQ
PFTNMGRITGVGSLDGRNEKFYQELQMLFELSLSFPVAKEAAPKASAIYYISKRRMMSYF
PWPTDEMRFRDDMLTRKQFQLATPEMNPQRSVFWSEAYVDSAGNGLLTTLGVPIYLDNDF
IGSINLDMTLASLAKQIRLYFKMPGTVILLDQGNNILSHSDFDTSSINRVYHISQRLPPE
LHSLPESELFDAHEGMIRNGYYIHSVALHNAPWRLLYLQNVDEMFSDSLEKLKATFFLVV
LALSILVTIVHWQTRRSFVSPASRLLSHLEECSRAPRRPPTRINKDWLPWFKLVSRIFEE
NQQYTKHLAEQNKRLDKLVARRTERLRETTERREQEFALLRSLLDSIPEAIVFKDKDGKY
LGCNRSAERVIGYSESEMIGLSDDDLMPAEMAARVRDEDQRILRDKVPMRYQEKVELAGK
PVLLDTLKLPFYNRRSELQGLIVVWRDVTREYESAEQLRLSEERYHLAMDAVEDGLWDWY
LDSEQIICNASFYTMLGYQPNEFPLLLNKMATLVHPDDLERVDEYRLGYLANPDGVFEIE
FRMLGKNGQYHWLLSRGRMVEFTEDNQPKRMLGTHKDITRQKSNEVALLEAKRDAELANL
YKSEFLANMSHEIRTPMNAIIGMLQLAQRTPLTAQQQDYLEKADFSAQSLLRIINDILDF
SKIEAGKMELEKVPFQLDRVLEHALDLNALKAQEKGIELLLYAPVTAGLVLSGDPLRLGQ
VLVNLLSNAVKFTSSGEIELGCEDVGERDHRITLKFWVRDTGIGIEHAKQQQLFDAFAQA
DGSTTRQYGGTGLGLSISKHLVSMMGGDLQVHSQPGEGSTFTFTISFEIDEEGKIEPLVM
PEKLNNLRTLVVDDNPSALQIYASQLRDFRFEVETATNGQEALQILQQQPIELLLLDWKM
PEMDGCDVLVAMDELLASGSLKQRPVVIMMTAYSAEPMAHELDSSRVYALLQKPFKASAL
FNEVINAFNEVQQPESVVEEPLLLTDASRGEILLVEDNLINQQVAMELLRSAGFNVDLAE
NGQMALEMVPAKHYDAVLMDIQMPVMDGLTATRELRKTYSAEQLPIIAMTAHAMSGDRDK
SLEAGMNAHITKPIMLNELFDTLNHWVPKT
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccactgagccagatctccagcttaaatcgccaattcaaaaaaactacaaccga
gcagtgttttacacctatatcggggtgttggtgttggcctcgttgaccgcttggctctac
tttgaacgccaaaaaaatgagcagatggtgcagcgtgaagagcagattgatcgtcacgtg
atgcagattgacctgttgttggaatccagtattcgcgcggtcaaaagcttacgtaatatt
gccgttgatcatctgcgcctcgcggaagatgttcgcaaagaccgattaccgcagtaccag
aaatttaatgaacaagggcaatactttaccctagagccgacctacgccaacagcggccag
ccgtttaccaatatggggcggattaccggtgtcggctcactggatggccgcaacgaaaag
ttctatcaagagttacagatgctgtttgagctgtcgctgtcatttccagttgcgaaggaa
gcggcacctaaagcttcggccatctattacatctccaagcggcgaatgatgtcctacttc
ccttggccaacagatgagatgcgctttcgcgatgacatgctgacccgcaagcagtttcaa
ctggccacgccagagatgaacccacaacgcagcgtgttttggagtgaggcctacgttgat
agtgcaggcaacgggctactgaccacgctcggggtgccgatttatctcgataacgatttt
attggttcgatcaatcttgatatgaccttggcgtcgctggccaagcagatccgtctctat
ttcaaaatgccgggcacagtgattctgctcgaccaaggcaacaatattctgtcccatagc
gattttgatacctcaagcattaaccgtgtgtatcacatcagccagcgcctgccgccggaa
ctgcattcgctgccagaatctgaactgtttgatgcccacgaagggatgattcgcaacggt
tactacattcactcggttgcgctgcacaatgcaccgtggcgtttgctgtacctgcaaaac
gtcgatgagatgttttctgactcgctagaaaaattgaaagccaccttctttttggtggtg
ctggcgttgtcgattttggtgacaatcgtgcactggcaaactcgccgctcatttgtgagc
cctgcatcgagattgttgtcgcatctcgaagagtgctcccgtgcgccacggcgaccaccg
acgcgcatcaataaagactggctgccttggtttaagttggttagccgcatttttgaagaa
aaccaacagtacaccaagcacttggccgaacagaataaacgcctcgataagctggtggca
cggcgtactgaacgtttacgcgaaaccaccgaacgccgtgagcaagagtttgccctgctg
cgttctttgcttgatagcattccagaagcgattgtatttaaagataaagatggcaagtat
ctcggttgtaaccgttcagccgaacgggtgattggttacagtgaaagcgagatgattggt
ctgagtgatgatgatctgatgcccgctgaaatggcggcgcgggtcagagatgaagaccaa
cgtattctgcgcgacaaagtgccgatgcgttatcaagaaaaggtggagctggctggtaag
ccggtgttgctggatacgctcaaactgccgttctacaaccgccgcagcgaattgcagggg
ttgattgtggtgtggcgcgatgtcacccgtgaatatgaatcggccgagcagttacgcttg
tctgaagagcgctatcatctggcgatggacgcggtggaagacggtctgtgggactggtat
ctcgattcggaacagatcatctgtaacgcctcgttttatactatgttgggctatcagccg
aacgaattcccattgttgctcaataagatggcaacgctggttcatcctgatgatcttgag
cgcgtcgacgagtatcgcttgggctatttggccaatcctgatggcgtgtttgagattgaa
ttccgtatgctcggtaaaaatggtcagtaccattggttgctctctcgtggccgcatggtg
gaatttaccgaagataatcagccgaagcggatgttgggtacccacaaggatattacgcgg
cagaaaagtaacgaagtggcgctgcttgaggccaaacgtgatgcggaactggcaaacctc
tacaagagcgagttcttggccaacatgagccatgaaatccgcacgccaatgaacgcgatt
attggcatgttgcagttggcacagcgtaccccgctgactgcacagcaacaggactatttg
gaaaaagccgatttctcagcgcaatcgttactgcgcatcatcaacgatattctcgacttc
tccaaaattgaagccggcaaaatggagttggaaaaagtgccattccagctcgacagagtg
ctggaacatgcgctggatctcaacgccctaaaagcacaagagaaaggtattgagctgctg
ctgtacgcaccggttaccgccggattagtgctcagtggtgacccgctgcggctggggcag
gtgttggtcaatctgctgtctaacgcggtcaaatttaccagcagcggtgaaatcgaatta
ggttgtgaagatgtgggcgagcgcgaccatcgcattaccctgaaattctgggtacgtgat
accggcataggtatcgagcatgccaaacagcaacaactgtttgatgccttcgcccaagcc
gatggttccaccacccggcagtatggcggcaccggccttgggttatcgatcagtaaacat
ctggtgtcgatgatgggcggtgacttgcaggtgcacagtcaaccgggcgagggcagcact
tttacctttaccatcagttttgaaattgatgaggagggtaagatcgagccattggtgatg
ccggaaaaactgaataacctgcgtaccttagtggttgatgataacccatcagcactgcag
atttatgcctcgcaattgcgagatttccgctttgaagtggaaaccgcaaccaacggtcaa
gaggcgttgcagatattgcagcagcaacccattgagctgttgttgctcgactggaagatg
ccagagatggatggctgtgatgtgctggtggcgatggatgagttactggcaagtggcagt
ttaaaacagcgcccagtcgtcatcatgatgaccgcctattccgcagagccgatggcgcat
gaactcgattcatcacgagtgtatgccctgctgcaaaagccgtttaaagcctcggctttg
tttaatgaagtgatcaacgccttcaacgaagtgcagcaaccggaaagtgtcgtcgaagag
ccgctgctgttgaccgacgccagccgcggagaaatcctgttggtcgaagataacttgatt
aaccagcaagtggcgatggaactgctacgcagtgccggctttaatgtggatctcgccgaa
aacggccagatggcgttagagatggtaccggcgaagcactacgacgcggtattgatggat
attcagatgccagtaatggacggtttaaccgcaacacgcgagctacgtaaaacatactcg
gctgagcagttaccgattatcgccatgaccgcccatgccatgtcgggcgatcgcgataag
agtcttgaagcgggaatgaatgctcatatcaccaagccgattatgctcaatgaattgttt
gataccttaaatcattgggtaccaaaaacttga
DBGET
integrated database retrieval system
