Shewanella avicenniae: JYB87_02450
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Entry
JYB87_02450 CDS
T07845
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_02450 (tcdA)
Transfer RNA biogenesis [BR:
savi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JYB87_02450 (tcdA)
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GFIT
Motif
Pfam:
ThiF
3HCDH_N
Shikimate_DH
DUF6216
Motif
Other DBs
NCBI-ProteinID:
QSX35386
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Position
568735..569526
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AA seq
263 aa
AA seq
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MFNSELYQQRFGGIGRLYGVDALLAFSQAKVMVVGIGGVGTWVAESLARSGIGCIQLMDL
DDVCVTNTNRQIHALASTIGQSKVAVMAERIKAINPLCDVIELEDFIAADNLNDYLPRDN
APDYVIDCIDAVKPKAALIAWCKRNKIKIVTIGGAGGQIDPSQVKLTDLAKTVQDPLLAK
VRSLLRKEYGFSQNVQRKFAVDAVFSTEHLKYPKADGSVCETKEGLTGSMRMDCASGFGA
VSVVTGTFGFHAVARVLQKLAAV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattctgagctttatcaacagcgttttggcggcatcggccgattatatggtgtt
gatgcattattagccttttcccaagcaaaagtgatggtagttggcataggcggtgtgggg
acatgggtcgctgaatcgttggcgcgcagtggtatcggatgtattcagttgatggatctc
gatgatgtgtgcgtaaccaataccaaccgccaaatccatgcactggcatctaccattggt
caatccaaagtggcggtgatggcagaacgaataaaggcaattaatccgctctgtgacgtt
atcgaactggaagattttattgcggcggataatctcaatgactacctaccacgcgataat
gcaccagactatgtaattgattgtattgatgcagttaagcctaaagcggcgcttattgcc
tggtgtaaacgcaataaaatcaaaatcgttaccattggtggtgcgggcggacagattgac
ccttcgcaggtcaaactcaccgatttagcaaaaacagtacaagatccattgctggccaaa
gtacgcagtttattgcgcaaagaatatggctttagccaaaacgtccaacgtaaattcgca
gtggatgcggtcttttcaaccgagcatctcaagtaccccaaagcagatggctcagtttgt
gaaacaaaagaagggcttaccggcagtatgcggatggattgcgcttcagggtttggggct
gtgtccgtggtaacggggacattcggctttcatgcggtggcgcgggtgctgcaaaaattg
gcagcggtttaa
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