Shewanella avicenniae: JYB87_02490
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Entry
JYB87_02490 CDS
T07845
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_02490
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_02490
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Paralog
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Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QSX34133
UniProt:
A0ABX7QU00
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Position
577678..580686
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AA seq
1002 aa
AA seq
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MSTNKFKLSLVALAVLGINAPAAFAAEKDANIEVQAPQAPTAAAANDQKANAPKVKPDEH
IVVTGSRLQYGNVVSKPTIITEQDIKERGVSSVEELIRTLPQNLATIGGMANSRVRGPLG
VADGSPSNMSSIGALGVSAANLGGMGAGRTLILVNGRRMAGAAGIQDGFVNLNGIPLSAI
ERVEITTDGASAVYGADAMGGVINFILKSGYTGTTVTVQHEDSNNGADNSRFSVYSGYGW
NSGTVSMTLDYSKRKPVINAKTGYVTNDYSAYYDGDENFDRRSFSNGGQPGIINNSTSYY
DWDLDAYINTISAYTIRDGYAGGRPTMDDMVEVGREAIRDFVPRVGGPDTESKSVTLNFE
QELTDKLKVYGTGLFTRNESSQDVIESDGISLTMAPGQYYNPFPEYYFSSWDPGVTAYYY
PEDELASGQMPYGHSQNRSDTWSLNAGVSYEFNKDTKLEFIYTTSRATTKGATYDYDSIV
SMISDSASPNGFRCYNFQLDYGRYAGAEQAFYQDLFDRQCAALTSNDPNIAFNPWKSTAD
GSGSGLDPFYYRHNSESRGSRLENYELRLNGALMELPAGKVYYAVGGEYNDDGIDSNEVK
VMTGEAVHRTRNGFFAEASVPVFGHKLNFPGMNALTLSLAARRDSYSTEGALGTIDGVPV
EQGGEILYGKNTFTRWTPSYGFKWEPISDVTVRAKWTEGFKAPPYTAMFNVTGTSSYTAY
LTNDPYYDCRANADCDFDWGSSYGYYAPRTTAPNEKLKPQTSKQASYTVSWLPSGVLSGL
TVDVTYNNTKIDNEYADLDDLNHYAPFEQTVALEDFYPRDENGKITAVRNMTFNMSGSEY
SSLLYEVGYYLYTDFGSFKPHLTFIRNLKSETKLFADSDPMSDVGHLGGVDRYKMTGSLQ
YTYNNFSATLWAYYLPSYINDYEVQLSAGQEINPEKNKDVGSMTTFDLTMSYQLSNSLRV
NFAGRNIFDRAPSFVVVEQLPYDVARYNVAGRTLSLELQYEF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccaacaaattcaaattgtcattagtggcattagcggtactggggatcaatgct
ccagctgcctttgctgccgaaaaagacgccaacattgaagttcaagcgcctcaagcccct
acagctgcggcggcgaatgatcaaaaggcaaacgcgcctaaggttaaacccgatgaacat
atcgtcgtgactggttcacgcttgcaatatggtaacgtggtttctaagccgacgatcatc
actgaacaagatattaaagagcgcggtgtgagcagcgttgaagagctgatccgcacactg
cctcaaaacttggccaccattggtggtatggctaacagccgtgttagaggtccactgggt
gtggctgatggtagcccatcaaacatgtcatcgattggtgcgctgggtgtctctgcggcg
aacttaggtggtatgggcgcaggccgtacattgattctggttaatggtcgccgtatggcg
ggtgctgccggtattcaagatggcttcgttaacctgaacggtattccattgagcgcgatc
gagcgcgttgaaatcactactgacggtgcatctgcggtatacggtgctgatgcaatgggc
ggcgtaatcaacttcattctgaagagtggctacaccggcaccacagtgaccgtgcaacac
gaagattcaaacaacggcgctgataactctcgctttagcgtttacagtggctatggctgg
aactctggtaccgtgtctatgacgctggattacagcaaacgtaagccggttatcaacgct
aaaactggttacgtgactaacgactactctgcttactacgatggcgatgagaactttgac
cgtcgttcgtttagcaatggcgggcaacccggcatcatcaataactctaccagttattat
gactgggacttagacgcctatatcaacactatcagtgcttacaccattcgcgatggctat
gctggtggccgcccaactatggacgacatggtggaagtgggtcgtgaagcgatccgtgac
tttgtgcctcgcgtcggtggtccagacactgagtctaagagcgttacgctgaactttgaa
caagagttgactgataagctgaaagtctacggcactggtttgttcactcgcaacgaatcc
tcacaagatgtgattgaaagcgatggcatttcactcactatggcgccagggcaatactac
aacccattccctgaatactatttcagttcatgggatccgggcgttactgcttactactac
ccagaagacgagttagcctcaggtcaaatgccatacggtcacagtcaaaaccgcagtgac
acttggagcttgaatgctggggtaagttatgaattcaacaaagatactaagttggaattc
atctacaccacctcacgtgcaaccactaaaggtgcaacctacgactacgattcaatcgta
tcgatgatttctgattcggcatcgccaaatggtttccgttgctataacttccaactggat
tatggccgttacgcaggagccgagcaggcgttttatcaagacctgtttgatcgccaatgt
gcggcattaaccagcaatgaccctaacatcgctttcaacccatggaagtcaactgcagat
ggttctggcagcggtttagatccgttctactatcgtcataacagtgaatctcgtggttca
cgcttggaaaactatgagctgcgtttgaatggcgcactgatggaactgccagcgggtaaa
gtgtattacgccgttggtggtgagtataacgacgatggcattgatagtaacgaagttaaa
gtaatgactggtgaagcggttcaccgcacccgtaatggtttctttgctgaagccagcgtg
ccggtgtttggtcataagctgaacttccctgggatgaacgcgttaaccctgagcttagcg
gcgcgccgcgatagctactctaccgaaggtgccttgggcactattgatggcgtacctgtc
gagcagggtggcgagatcctttacggtaaaaacactttcacccgttggactccaagctat
ggtttcaaatgggaaccgatcagtgacgtgactgtacgtgccaaatggactgaaggcttt
aaagcgccgccatacactgcgatgtttaacgtgacgggtacaagttcatataccgcttat
ctgaccaacgatccttattacgattgccgtgcaaacgcagattgtgacttcgactggggc
agttcttatggctactacgcaccaagaaccactgcaccaaatgagaagctgaagccacaa
acctcgaagcaagcctcgtacacagtgtcttggttgccaagtggcgtattgtctggtttg
acggttgatgtcacctacaacaacaccaagatcgacaacgaatacgctgatctggatgat
ctgaaccattacgcaccgtttgaacaaaccgttgcgctggaagatttttatccacgtgat
gaaaacggcaagattaccgctgtacgtaacatgaccttcaacatgtcaggttcagagtac
tcgtcactgctgtatgaagtaggttactacctgtacaccgacttcggttcattcaagcca
cacctgactttcatccgtaacctgaagtcagaaaccaagctgtttgctgacagtgatcca
atgtctgacgtgggtcacctgggtggcgttgatcgctacaagatgaccggttcattgcag
tacacctacaataatttcagcgctacactgtgggcttactatctgccgtcgtatatcaac
gactacgaagtacagctgtcagcgggtcaagaaattaacccagagaagaacaaagatgtc
ggctcgatgacgacgtttgatttgactatgtcttatcaacttagcaacagcctgcgcgtg
aacttcgctggtcgtaacatctttgatagagcgccttcatttgtggttgttgaacaacta
ccgtacgatgtagcacgctataatgtggctgggcgtacgctgtcactggaactgcaatac
gagttctaa
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