Shewanella avicenniae: JYB87_02560
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Entry
JYB87_02560 CDS
T07845
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
savi
Shewanella avicenniae
Pathway
savi02020
Two-component system
savi02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYB87_02560
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JYB87_02560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
savi02035
]
JYB87_02560
Bacterial motility proteins [BR:
savi02035
]
Flagellar system
Chemotaxis proteins
MCPs
JYB87_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HBM
4HB_MCP_1
ANIS5_cation-bd
TMP_3
SieB
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
QSX34147
UniProt:
A0ABX7QT04
LinkDB
All DBs
Position
604444..606354
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AA seq
636 aa
AA seq
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MENISIAAKLGIGFGILIVCSLVLSLTGWTGLDNVIDGGKKLYAIQHVNKVISDTKAARE
NYLRSMSADHKQQLADNIQEIITALNTQKLKYQSEAAIIKIEQALSAMNSYQGVFQRLAA
VVDNKASKSASALQMADDAIRLQAQLVNQLDASADPASHWQTMAELNAISVQLEQLKNIA
NHWLLGGAKDPQIYSQVQSKLANAMTDLAAVSQRDASVNSRSTVEALNQLQSVYQQLVQI
DVSVVQLTDEFASVAVTVRNSIDALEQFQTERQRGFSSQAQMMLIIVSVIAILVGIVLTQ
RITALIAKPLHETAELALKIAKGDLSQHFTNITRKDEVGVLQSAMAEMNTALKELCGNVS
SGISELAAAATQLSAVTEQNRVGMRQQHVEIEQVAAAMNEMTTTVHDVASNAEQASEATT
SAEQVTKDGSLCVESAMQGVQELSRVIDQTSAAMEALAQQSDSIGGVLEVIKTVAEQTNL
LALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQQSTSEIETMIQKLQDEAHNSLRLMGT
SREIAMANADAAGSVGALFERIASAVSHIQSMNQQIATAAEEQSVVAEEINRRVVQVNDI
ADETALASNETAEATERLAALGTQLKGAIARFIVAC
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatttcgattgcagcaaagctaggaatcggctttggtattctcattgtttgt
agcttagttttgtcacttactgggtggacgggccttgataatgtgattgatgggggaaag
aagctttacgcgattcagcatgttaataaagttatttcagacaccaaagccgcacgcgaa
aactacctgcgcagcatgagcgccgatcacaaacaacagcttgccgataacattcaagaa
atcatcaccgcgctaaacacccaaaaactaaaataccaatcagaagcagcgatcattaag
attgagcaagccttgagtgctatgaatagctatcaaggtgtattccaacggctcgcagct
gtggtggataacaaagcgagtaagtcagcctcggcattgcaaatggcggatgatgcgatt
cgcttacaagcacagttagtgaatcagttggacgccagcgctgacccagcaagccattgg
caaactatggctgagttgaatgcgatcagcgtgcagttggagcaattgaagaatattgcc
aatcattggttgctggggggtgcgaaagatccacagatctactcgcaggttcaatccaaa
ttagccaacgcaatgactgacttggcagctgtgagtcagcgcgatgccagcgtcaacagc
cgcagcacagtggaagcattgaatcagttgcaatcagtttaccaacaactggtgcagatt
gatgtcagcgtagtgcagctcactgatgagtttgccagcgttgccgtaacggtacgtaac
agcattgatgccttagagcagttccaaaccgaacgccaacgcggtttcagtagtcaggca
caaatgatgttaattatcgtgtctgtcattgcgatcctggtgggtatagtgttgacacaa
cgtattaccgcgctgatcgctaaaccattgcatgaaaccgctgagttggcgttaaaaatc
gcgaaaggcgatttgagccagcactttactaacattactcgtaaagatgaagtgggtgtg
ttgcagagcgctatggctgaaatgaacaccgccttgaaagagttatgcggcaacgtatct
tctggaatttctgagttagcggcggcggcaactcagctgtcggcggtgaccgaacaaaac
cgcgtagggatgcgtcagcagcatgttgaaatcgaacaagtcgctgcagccatgaacgag
atgactaccacagtgcatgatgtggccagcaacgcggaacaggcgtctgaggctacaacc
tcggcagaacaagtgaccaaagacggctccctctgtgtggaatcggccatgcaaggggtg
caagagctgagtcgggtgattgaccaaacttctgcggcgatggaagcgctggcgcaacaa
agtgacagcatcggcggcgttttggaagtgattaaaaccgtggctgaacaaactaacttg
ctggcactgaacgcggccattgaggcggcgcgcgccggtgaggcagggcgaggttttgcc
gtagtggcagacgaagtgcgtaacttggcgcaacgtactcaacaatcgacttctgaaatt
gaaactatgattcagaagttacaagatgaagcacataactctctgaggttgatgggcacc
agtcgagagattgccatggcaaatgccgatgcagcaggaagtgtcggtgctttgtttgag
cgtatcgccagtgctgtgtctcacattcaatcgatgaaccagcagattgccactgccgcc
gaagagcaaagcgtggttgcggaagagatcaaccgccgcgtggtgcaggtgaatgacatt
gccgatgaaactgcgttagcgtctaacgaaaccgctgaagccactgaacgcttggcggct
ttaggcacgcaactaaaaggtgccatagcccgatttatcgtggcttgttag
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