Shewanella avicenniae: JYB87_02965
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Entry
JYB87_02965 CDS
T07845
Name
(GenBank) ExeM/NucH family extracellular endonuclease
KO
K07004
uncharacterized protein
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
JYB87_02965
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_2
Endonuclease_1
CBM49
VSG_B
DUF2393
Motif
Other DBs
NCBI-ProteinID:
QSX34227
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Position
complement(692839..696780)
Genome browser
AA seq
1313 aa
AA seq
DB search
MKINLALQLSAVLVSASAFSADMVITGVVDGPLTGGIPKAVEIYVVNDISDLSRCGINLA
TNGAAAPAYHSTFSGTATAGSFLYASFEVPGFSAFFGFEPDQSTPTFNGDDVVQLQCDGV
VIDSFGELGVDGTGTPWEYMDGWAHRNSGTTADGAQFNLANWSFSGPNALDDQTSNATAP
TPYPLGSFVYGDDNGDTGTGGDTGTGGDTGTGGDTGTGGDTGTGGDTGTGSDTGTGGDTG
TGGDTTPCFNCSELTPVADPASFSDAAYYAAAINAENSGADAATLKSAINSAISHGQKKL
SYGEVWTALTHTDEDPENADNVILLYSGRSMSKHSNGSGTQSNNQDNWNREHVWAKSHGF
SAESNEAYTDINHLRPADISINASRGNLDFDNSDNPLTEDPQNRIDGDSFEPRDAVKGDV
ARMLMYMDTRYEGNGDVTPDLVLVNHLTSGGAPELGLLCRMLEWAKQDPVDNFERKRNNA
IYQYQGNRNPYIDHPEWISEVYGDAQCDGSDNGTGGDNGTGGNEPETPPEQPLTLGQCAA
DATLISAIQGNGDVSPLAGETVVIEGVVTSVNAGAKAFFVQEEAADEDGDANTSEAIYIY
NRSQPMPAVGSVVRVMGAVSEYHEKTEITLSDMLNCGSGSITPLAITLPFSSKADMERLE
GMLVTVDGDLMVTNNNSLGQYGEVTLSSKRLFTPTNLYKPGSAEAIALQQANALDQLVLD
DGNSKSYPDSQRYPTGGLSAANSLRTGDLVTNLRGVIDFSYDVYRLIPTEEPQFIANNSR
PEHPPVAVGDVSIASMNVLNLFNGDGNGAGFPTSRGADTAEEYERQVAKTVAAIIASNAD
IIGLMEIENDGFDANSAIADLVKRVNIKLGENAYAFINANGKVGTDEITVGMLYRPANVS
TVGDVQLNLDSVFSRPPMAQGFKLVNSDEQFTVVVNHFKSKGCSNAKGADADQNDGQSCY
NAKRVQQAQALLQWFATDETLSQQPNKVIIGDLNAYAKEDPVTTLTDAGFVDLINKFQAD
AGYSYQFDGLFGYMDHILVSAGLAETAVDAADWHINADEPTILDYNTESKSAQQLVDYYA
ADQYRVSDHDPVIATLKLIANNAPALCQHEITQRWQGGFQGVIRITNQSEETIKGWQVDW
GYDNGDSVTNLWNGKLQGKGPYTVKNLSWNKEIAPGQTIEVGFNGSGDGQDTDVTGDICQ
APVVKPHPGNGQVDQPTAQCAYQLTNSWPGGFQGAVKITNTGKVAIRGWQVAWSFLDNST
ISSNWNALLNGDNPYNASNLEWNKTIAPGQTVEFGFIGNGSGQASAINGDICQ
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaatctggcattacagctatcggctgtgcttgtctctgcttccgccttttcc
gcagatatggtcatcactggcgtagtcgatggcccgctgaccggaggcattcctaaagca
gtagaaatttatgtcgtcaacgacataagcgatttaagccgttgtggtatcaacttagcc
acgaatggtgccgcagctccggcttaccacagcacatttagtggcactgcaaccgcgggt
agctttttatacgcctcttttgaagtgcctgggtttagcgcgttttttggctttgaacct
gatcagagcacaccaactttcaacggtgacgacgttgtacaactgcaatgtgacggtgtg
gtcatcgacagctttggcgagctaggtgttgacggtactggtacgccttgggaatacatg
gacggctgggcacatcgaaatagcggcacaactgctgatggtgcgcaattcaatttggcc
aactggagctttagtggcccgaatgccttagacgatcaaaccagtaatgcgactgcgcca
accccgtacccactcggcagctttgtctatggtgatgacaacggtgataccggcactggc
ggcgatactggcactggcggcgatactggcactggcggtgataccggcactggcggtgat
actggcactggcggcgatactggcaccggcagcgatactggcactggtggcgacacgggt
actggcggcgataccacgccatgctttaactgcagcgagctcaccccagttgctgatccg
gccagctttagcgatgcggcttattatgcagcggcaattaatgctgaaaacagcggtgcc
gatgcggccacattaaaatccgcaatcaacagcgccatcagccacggtcagaaaaaactc
agctatggcgaagtatggacagcactgacccataccgacgaagaccctgagaatgccgat
aacgtgatcctgctgtacagcggtcgctcaatgtcaaaacacagtaacggctctggcact
caaagcaataaccaagataactggaaccgcgaacacgtgtgggccaagagtcatggtttt
agcgcggaatccaatgaagcttataccgacattaaccacttgcgtcctgccgatatctca
atcaacgcttctcgcggtaatttggattttgataacagtgataatccgttaactgaagat
ccacaaaaccgtatcgacggcgattcatttgaaccgcgcgatgccgtaaaaggcgacgtc
gcccgcatgctgatgtatatggatacccgctatgaaggcaatggcgatgtcacccctgat
ttggtgttagttaaccatctgaccagtggcggtgcccctgagctggggctgttatgccgt
atgctagagtgggccaagcaagaccctgtcgataacttcgagcgtaagcgcaacaacgcc
atctaccaataccaaggtaaccgtaacccttacatcgaccatccagaatggattagcgaa
gtctatggcgatgcccaatgtgatggcagtgataacggaacgggtggtgataacggcact
ggcggcaatgagccagaaacaccgcctgagcaaccactgaccctcggccaatgtgctgcg
gatgccacgctgatcagcgcgatccaaggtaatggcgatgtatcgccactggcgggtgaa
acagtggtcattgaaggtgtggtgacctcagtcaacgctggcgctaaagcattcttcgtg
caagaagaagccgccgatgaagatggtgatgccaatacctctgaagcaatctacatctac
aaccgtagccaaccaatgccagctgttggcagcgtggtacgtgtgatgggtgcagtttcg
gaatatcacgaaaaaaccgaaatcaccctgagcgacatgctgaactgtggtagcggtagc
atcacaccgctggccattactctgccattcagctccaaagccgatatggaacgtttggaa
ggcatgttagtgactgttgatggcgacctgatggtaaccaacaacaattcactcggtcaa
tatggcgaagtgaccttgtcgagcaagcgtctgttcaccccaaccaacctgtacaagccg
ggctctgctgaagcgattgcactgcaacaagcgaacgcgctggatcaactggtattggat
gatggcaacagcaagtcatatccagacagccaacgttatccaactggcggtttgtctgcg
gctaacagcctgcgtacaggcgatttggtcaccaacctgcgtggcgtcattgatttcagt
tatgacgtgtatcgtttgatcccaaccgaagaaccgcaatttattgccaacaacagccgc
ccagaacatccgccagtggccgtgggtgatgtgtctattgccagcatgaacgtgttgaac
ctgttcaatggtgacggcaatggtgcaggcttcccaacctcgcgtggtgcagacactgca
gaagagtatgaacgccaagtagccaaaactgtcgcggcaatcatcgccagcaatgccgac
atcatcgggctgatggagattgaaaacgacggctttgacgccaacagcgcaatcgccgat
ctggtgaaacgcgttaacatcaaactgggtgaaaacgcgtatgccttcatcaatgccaac
ggcaaagtcggcactgatgaaattactgtgggcatgctttaccgtccagccaatgtcagc
actgtgggtgacgtacaactgaaccttgatagtgtgtttagccgtccacctatggcacaa
ggctttaaactggttaacagtgatgagcagttcaccgtagtggttaaccactttaaatca
aaaggttgtagcaatgccaagggcgctgacgccgaccaaaatgatggccaaagctgctat
aacgccaagcgcgttcagcaagctcaagccttgttgcaatggtttgcgactgacgaaacc
ttaagccaacagccaaacaaagtgattatcggtgatttgaacgcttacgcgaaagaagat
ccagtcacgaccttgactgacgcaggctttgtcgatctgatcaacaagttccaagctgat
gcaggttactcataccagttcgacggtttgttcggctacatggaccatattctggtctct
gcaggcttagcggaaaccgcggtagatgctgctgattggcacatcaacgctgacgagcca
acgattttggactacaacactgagtctaaatcagcgcagcaactggtggactactacgcg
gcagatcaatatcgcgtctcagatcatgatcccgtcatcgcaaccttaaagctgattgct
aataacgcacctgccttatgccaacatgagatcactcagcgctggcaaggtggcttccaa
ggggttatccgcattactaaccaatctgaagagactatcaaaggttggcaagtcgactgg
ggttatgacaatggtgatagcgtcaccaatctgtggaacggcaagctgcaaggcaaaggc
ccttacacagtgaaaaacctcagctggaacaaagagattgcaccagggcaaaccatcgaa
gtcggctttaatggcagcggtgatggccaagatactgacgtgactggcgacatctgccaa
gcaccagtagttaaaccgcatccaggtaacggccaagttgatcaaccgaccgcgcaatgt
gcttatcagttgaccaacagctggccgggcggattccaaggcgcagtgaaaatcaccaac
acaggtaaagtggccattcgcggctggcaggtagcgtggtcgttcctcgacaacagcact
atcagcagtaactggaatgcactgctgaacggggacaatccatacaacgccagcaacctt
gaatggaacaaaaccatcgcgccgggacaaaccgttgagttcggttttatcggtaacggt
agcggtcaagcctcagcaattaacggcgatatctgccaataa
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