Shewanella avicenniae: JYB87_03870
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Entry
JYB87_03870 CDS
T07845
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
savi03009
]
JYB87_03870
Enzymes [BR:
savi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JYB87_03870
Ribosome biogenesis [BR:
savi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB87_03870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Phage_depo_C
Motif
Other DBs
NCBI-ProteinID:
QSX34398
UniProt:
A0ABX7QSH1
LinkDB
All DBs
Position
891426..892154
Genome browser
AA seq
242 aa
AA seq
DB search
MNSKRGRIDRFLASRLQIPAKQAQLLIRQGEVLLDGQACSAVDRIINEFTRIECQGQLLQ
ALTPAYWMLHKPAGVVSATTDAAHQTVLSLLPDEAQTQQLHIAGRLDKQTTGLLLLTNDA
RWSEAISQPSANKYKHYRVTLQNPLTEAYVAAFAQGFYFDYEGITTAPAQLNIISDYVAD
VILTEGKYHQIKRMFGRFRNPVVALHRYQVGQIVLDDGLALGQCRPLTAEEIASVAENSE
PN
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaaacgaggccgtatcgaccggtttctggcgagtcgattgcaaattcccgcc
aagcaagcgcagctgttaattcgccaaggtgaggtgctgctggacgggcaagcgtgcagc
gctgtcgatcgcatcatcaatgaattcactcgaattgaatgccaagggcaactgctgcaa
gcgttaacgccagcctattggatgttgcataaacccgccggtgtagtcagtgccactacg
gatgcagcgcatcaaacggtgctgagtttactgcctgatgaggctcaaacgcagcagctc
catattgccggccggttagataaacagaccaccggcttgttgttactgactaacgatgcg
cgctggagtgaggcgatttcgcagccctctgctaataagtacaaacactaccgcgtgacc
ttgcagaatccgctaacagaggcgtatgtggcggcctttgcccaaggtttttactttgat
tatgaagggattaccacagcgccagcgcaattgaatatcatctcggattatgtggcggat
gtgatactcactgaagggaagtaccatcagatcaagcggatgtttggccgttttcgtaac
ccagtcgtagcgctgcatcgttatcaagtggggcaaatcgtgctggatgacggtttagca
ctggggcaatgtcgtccattaacggcggaagaaattgcttctgttgcagaaaatagcgag
ccaaactag
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