Shewanella avicenniae: JYB87_04020
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Entry
JYB87_04020 CDS
T07845
Name
(GenBank) methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
savi
Shewanella avicenniae
Pathway
savi02020
Two-component system
savi02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYB87_04020
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JYB87_04020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
savi02035
]
JYB87_04020
Bacterial motility proteins [BR:
savi02035
]
Flagellar system
Chemotaxis proteins
MCPs
JYB87_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
DUF948
DUF2975
Motif
Other DBs
NCBI-ProteinID:
QSX34426
LinkDB
All DBs
Position
930576..932603
Genome browser
AA seq
675 aa
AA seq
DB search
MRIHSIRIKMILPIAFLAIILIGLFSFMAVMSMLQKHAMKMQAENYFEAIATVLNADRDI
YQARLAQSRYLNGNGEKAANQKDFDDNAQQVNDRFHQYLKYLEDEPELTAPFSNFTPLFN
EWTSASNKVMNTSQVAENLTQALIAGDNEFQQIRNMLDMAGESLREHTRDIEKNKNADIS
QYVEAMAEVLNADRDIYQARLALEKLIHNEGNYDKNLAFFEENAKQVIQRFHNYRSYLIN
EPLLVAPYDAFDALYSKWYSQSQSLITSPDATTQRSLPDDVKTMDSKFAAIRNVLDQAGD
AARNHAREMKEELNQKVDSYQNMAMVIICIAFIAALVVGYVIPLRLTREVEHIARRIKEI
AEGDGDLTQRIGSSGKDELGDLAREFDGFVAHLRKIVGNIQQNSAALGGTTFELNKVSEQ
AGQITSGLVHASEAIVSAGSEMNMSNQHMAELAKGTADESKTSSILTQNGVKAVTASNRA
IDSLVKDIGVALERATVLEQSSASIASVLEVIRKIAEQTNLLALNAAIEAARAGEQGRGF
AVVADEVRVLATRTQSSTDEIETMIERLKSSVAEAAQAIRNSRGNADSTVTNFEEVMRIF
ESLSESFDKVQDMAAQTAQATQEQSTVANHINQNLVALKEQTDGVSEMADQVQQQSSQIS
KLYQALNRQVDSFKV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcactcaatcagaattaagatgattctaccgattgcatttttggcgataatt
cttattggtttattcagctttatggcggtgatgagcatgctgcaaaagcatgcgatgaag
atgcaagccgaaaattattttgaagcaattgcaactgtgctcaacgccgaccgtgatatt
taccaagcgcgtctagcacaatcccgttatctcaatggcaacggggaaaaggccgctaat
caaaaagattttgatgacaatgcgcagcaggtaaatgaccgctttcatcaatatctaaag
tacttagaggatgagccagagttaacggccccttttagtaactttacgccgttgtttaat
gagtggaccagtgccagcaataaggtgatgaacacctcgcaagtggcggaaaacctcact
caagcgcttattgcgggcgacaatgagtttcaacagatccgcaacatgctcgacatggcg
ggtgaatcattacgcgaacatacccgtgatattgaaaaaaacaaaaatgctgatatttcg
cagtatgttgaagcgatggctgaagtgctaaatgctgatcgagacatctatcaagcgcgg
ttggcgttagaaaagctaatccataatgaaggcaactatgataaaaacttggccttcttt
gaagaaaacgccaagcaagtgattcagcgatttcataactatcgcagttatctgattaat
gaacctctgttggttgcgccttacgatgcgtttgatgcgctctacagcaagtggtattcg
cagagtcagtcacttatcacctcgcccgatgcaacgacgcaacgcagcctccctgatgat
gtcaaaaccatggacagcaaattcgctgctattcgtaatgtgcttgaccaagcgggagat
gcagcgcgtaaccatgcgcgtgagatgaaggaagagctcaaccaaaaagtcgatagctat
cagaatatggcgatggtcattatctgtatcgcctttatcgcggccttagtggtcggctac
gtcattccgttacgtttaacgcgtgaagttgaacatattgcacgtcgcattaaagagatt
gccgaaggtgatggtgatttaacccaacggattggcagcagcggtaaggatgaacttggc
gatctcgcccgagagtttgatggttttgtggcgcatctgcgcaagattgtcggcaatatt
caacaaaactctgccgccctcggtggcactacattcgagctcaacaaagtgtcggagcaa
gcggggcagattaccagcggtttggtgcacgcgtctgaggcgattgtgagtgctggcagt
gaaatgaatatgtcgaatcagcacatggcggaattagctaagggcacggcagatgaatcg
aaaacttccagcatactgacccagaatggggtgaaagcggtcaccgcttccaatcgcgcg
attgatagtttggtgaaagatattggggtggcgttagagcgagccacagtgttggaacaa
agctccgcctcgattgcctcggtgttagaggtgattcgcaaaatcgctgagcaaactaac
ttactggcgttgaatgccgcgattgaggctgctcgcgccggtgaacaagggcgcggcttt
gcggtggttgcagatgaggtacgggtattggccactcgtactcagagcagtaccgacgaa
attgagaccatgattgagcgattaaaatccagcgtggctgaggcggcgcaagcgatccgt
aacagccgcggcaatgctgacagcacggtaactaattttgaagaggtgatgcggatcttc
gaaagtttgagtgaatccttcgataaggtgcaggatatggcggcacaaaccgcccaagcc
actcaagaacaatccaccgtggcaaaccacatcaatcaaaatctagtggcgctgaaagag
caaactgacggtgtcagtgaaatggccgatcaggtgcagcagcagtcgtcgcaaatatcc
aaactgtatcaggcgcttaatcgtcaggtagacagctttaaggtatag
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