Shewanella avicenniae: JYB87_04395
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Entry
JYB87_04395 CDS
T07845
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
savi
Shewanella avicenniae
Pathway
savi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYB87_04395
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
savi01007
]
JYB87_04395
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_04395
Enzymes [BR:
savi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
JYB87_04395
Amino acid related enzymes [BR:
savi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
JYB87_04395
Transfer RNA biogenesis [BR:
savi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JYB87_04395
Prokaryotic type
JYB87_04395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
QSX34496
LinkDB
All DBs
Position
complement(1014984..1017845)
Genome browser
AA seq
953 aa
AA seq
DB search
MDKTYNPQSIEQALYKAWEEKGYFKPSGDSSNGNYSIMIPPPNVTGSLHMGHAFQDTIMD
TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDAFMEKVWEWKAQ
SGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYKDNLIYRGKRLVNWDPKLH
TAISDLEVENQEKQGSMWHFRYPLAGDALTADGKDYLVVATTRPETMLGDSAVAVHPEDE
RYASLIGKEIILPLVNRRIPIVADDYVDREFGTGCVKITPAHDFNDYEVGKRHSLPMFNI
MTLNGDIRATAEVLNTDGSQNTALDNSLPSEYAGMERFAARKAIVEAFDALGLLEKIEPH
SLKVPYGDRSGVVIEPLLTDQWYVAVKSLAEPAIKAVEDGDIKFVPQQYENMYFSWMRDI
QDWCISRQLWWGHRIPAWYDDAGNVYVGRSEAEVRSENNLSADIALRQDNDVLDTWFSSA
LWTFSTLGWPENTEDLKLFHPSDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKAQVPFKT
VYVTGLIRDEQGNKMSKSKGNVLDPLDMIDGIDLESLVQKRTGNMMQPQLAAKIEKSTRK
EFAEGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEEQD
CGQNGGEMTLSLADRWIISLFNETVKTFDDHINAFRFDLAANTLYEFTWNQFCDWYLELT
KPVLNSGTDAELRGTRHTLVTVLEQLLRLMHPLTPYITETIWHRVKPLAGVEGETLMLMP
FPEYQADKADTEAQADLEWVKQVIVAVRNIRAELNIAPSKPLNALLKDDSEKDAARLNAN
RTFLAALAKLESITVLADGEAAPMSTTQLVGKMELLIPMAGLIDVAAEMARIDKQLEKLA
QEAGRIENKLSNEGFVAKAPADVIEKERAKLADYQRDQEKLTEQKAELAKLEG
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacatacaacccgcagtcgattgaacaggcactctataaagcctgggaagag
aaaggctacttcaaaccaagtggtgatagcagcaacggcaactacagcatcatgatcccg
ccgccgaacgtcactggcagcctgcacatgggccatgcgttccaagacaccatcatggac
acgctgatccgttaccaacgcatgaaaggcaaaaataccctatggcaagtgggtaccgac
cacgccggtattgctacccaaatgctggttgagcgtaagctggaagccgaagaaggcaaa
agccgccacgacttaggccgtgatgcgttcatggaaaaagtatgggaatggaaagcgcaa
tcgggcggcaccatcaccaaacagctgcgtcgcatgggcgcttctgtagattgggatcgc
gaacgtttcaccatggatgaaggtttgtcaaaagcggtacaagaagtgtttgtccgtttg
tacaaagacaacctgatctaccgcggcaaacgtttggtgaactgggatccaaagctgcac
accgcgatttccgatctggaagttgaaaaccaagaaaaacaaggctctatgtggcacttc
cgctatccgctggcgggcgatgccctgaccgctgatggcaaagattacttggtggttgcg
actactcgtccagaaaccatgctgggtgatagcgccgtggcggtacatcctgaagatgaa
cgctacgcatccctcatcggtaaagagatcattttgccgctggtaaaccgtcgcattcct
attgtagctgacgactatgttgaccgcgaatttggcactggctgcgtgaaaatcacccca
gcgcacgacttcaacgactacgaagtcggtaagcgccacagcctgccaatgttcaacatc
atgacgctgaacggtgacatccgtgccaccgctgaagtgttgaacactgacggcagccaa
aacaccgcattggataacagcctgccaagcgaatacgccggcatggaacgtttcgcagca
cgtaaagcgattgttgaagcgtttgacgcactgggcttacttgaaaaaatcgagccacac
agcttgaaagtaccttacggtgaccgctcaggcgtggtgatcgaaccgctgctgaccgac
caatggtacgtggcagttaaatctctggctgagccagcgatcaaagcggttgaagatggc
gacatcaagttcgtgccacagcagtacgaaaacatgtacttctcgtggatgcgcgacatt
caagactggtgtatctcgcgtcagctgtggtggggtcaccgtattccagcatggtacgac
gatgccggtaacgtctacgttggccgtagcgaagcggaagtccgtagcgaaaataacctg
agtgccgatatcgccctgcgccaagacaacgacgtactggacacttggttcagctctgca
ttgtggaccttctcaacgctgggctggccagaaaacaccgaagatctaaaactgttccac
ccatctgatgtgttggtgaccggtttcgatatcatcttcttctgggtagcgcgcatgatc
atgatgaccatgcacttcatcaaagacgaagatggcaaagcgcaagtgccgttcaaaacc
gtgtacgtcaccggacttatccgtgacgagcaaggtaacaagatgtcgaaatctaagggc
aacgtgcttgacccattggatatgatcgacggtatcgacttggaatcactggtacaaaaa
cgtaccggtaacatgatgcagccacaactggccgccaagatcgaaaagagcacccgcaaa
gagtttgccgaaggcattgaagcccacggtactgacgcgctgcgctttaccttggctgcc
atggcctcaacgggccgcgacatcaattgggacatgaaacgtctggatggttaccgcagc
ttctgtaacaagttgtggaacgcttcgcgctacgtgttgatgaacactgaagagcaagac
tgtggtcagaacggcggcgagatgaccctgtcactggcggatcgctggatcatcagcctg
ttcaacgaaaccgtgaaaacctttgatgaccacatcaatgccttccgtttcgacttggcc
gctaacaccctgtacgaattcacttggaaccaattctgtgactggtacttggagctgact
aagccagtattgaacagcggcactgacgctgaactgcgcggtactcgccatacattggta
acggtactggagcaactgctgcgcttgatgcacccactgacaccatacatcactgaaacc
atctggcatcgcgtgaaaccgctggccggtgtagaaggtgaaaccctgatgttgatgccg
ttccctgagtatcaagcggataaagccgatactgaagcgcaagcggatctggaatgggtt
aaacaagtgattgtcgcggtacgtaacattcgtgctgagctgaacatcgccccatctaag
ccgctgaacgcattgctgaaagacgacagcgaaaaagacgctgcccgtttgaacgccaac
cgtaccttcttggccgcactggcgaagctggaaagcatcactgtattggcagacggcgaa
gcggcaccaatgtcgaccacacaattggtcggcaaaatggaactgctgatcccaatggca
ggcttgattgacgttgccgctgaaatggcgcgtatcgacaaacagctggaaaaactggcg
caagaagctggccgtattgagaacaaactttcgaacgaaggcttcgtcgctaaagcacca
gcagacgtgattgaaaaagaacgcgctaagctggctgactaccaacgtgaccaagaaaag
ctgactgaacagaaggcagaattggcgaagttggaaggctaa
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