Shewanella avicenniae: JYB87_04890
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Entry
JYB87_04890 CDS
T07845
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_04890
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_04890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
CarbopepD_reg_2
OMP_b-brl_3
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
QSX34587
LinkDB
All DBs
Position
complement(1130894..1133170)
Genome browser
AA seq
758 aa
AA seq
DB search
MKLAVLTMALAAAGVSSTAFAAQLQGKITDEQGNVIPKALISVDGGNQTTADESGNYSLN
VSDNSHIHLHISSALYKHAERDVQVTQGVLTENFSLIKSKIENIVVTASPLGRSAMESST
PISVLTEDQLKLNTEASLGDTLDKLPGVQATHFGAGASRPVIRGMDGPRVKVLENGLSVG
DASTVSADHAVTAEAASAQQIEILRGPGTLMYGNGAIGGVVNVVDKRISEQAIDTFNGNV
GARYDSANNGKTLTADLNGGKEGVNWHLDGTRRRTDSYDIPGNAIIGDESSHGNVDNSQL
QLDEYAAGIGYAGDSGFIGVSGTRTESNYGIPLKGEEDEPHITIDLKKTAWQLHGGLLDP
FAGFSKIRLDAGYTDYQHAEEENGDADTFFYNKQTEARLTLNNNPWAEWQGSMGLHVTHR
DFEVDGEEQLTPNSKTDTLAAFIVQERKVDDFRFELGARVEHYKLDPAQMSLDTLTGEAE
YQPNSISDTNVTASAGVVWDFHPSYNLSVALTRAERSATAEELYSYGPHDATQSFEIGSE
FQIVDGNIVTNAANAEKEIANNIDVTLRKLDGAWTGSISMAYNRVDNFFYEANTGLVAAD
LIASDEEGDMPVYQYQQGDAQLFSVEAQASIPFNDTWSLEMFTDYTRAKLVDGGNLPRIS
PMRFGSTLNFDQAQWHAEAGMVAYAKQDKTAENETDNSGYALVNAAVTYRIYTDNGDLFV
YLKGNNLTDREARPHTSLLKDYAPLMGRNVMLGINYNF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgctgtattaactatggcgctggccgccgctggcgttagctcaaccgcattt
gctgcacaactgcaaggtaaaatcactgacgaacaaggtaatgtcatccccaaggcgctg
atcagcgtcgatggcggtaatcaaaccactgccgacgaaagcggcaattattcgctcaat
gtcagtgataatagccatatccacctgcacatcagtagcgcactttacaaacacgctgag
cgcgatgtgcaagtgactcagggcgtactcactgaaaacttcagcctgataaaatctaag
attgaaaacattgtggtaaccgcctcaccgcttggccgttcggcgatggaaagtagcacg
ccaatatcagtacttaccgaagaccaactcaaactcaacaccgaagccagcttaggtgac
acgctcgataagctgccgggtgttcaagcgactcactttggcgccggcgctagccgccca
gtcatccgcgggatggatggcccacgggtgaaagtgctagaaaatggcttatctgttgga
gatgcctctaccgtttccgccgatcacgcggtcacagcagaagccgcctcagcacaacag
attgaaattctgcggggtccaggcaccttaatgtacggtaatggcgccattggcggtgtg
gtcaatgtggtcgataagcgcatcagcgaacaagccattgatacattcaatggcaatgtg
ggcgcgcgttatgacagtgcgaacaacggcaaaaccctcaccgcagaccttaacggtggt
aaagaaggcgttaactggcatcttgatggcacccgccgccgtaccgattcgtacgatatt
cccggcaacgcaatcatcggtgacgagagctctcacggcaatgtcgacaactcgcagctg
caattagatgaatacgcggcgggcattggttatgccggtgacagtggctttatcggtgta
tcaggtacccgtaccgaatcaaactatggcattccgctaaaaggtgaagaggacgaacct
catatcaccatcgacttgaagaaaaccgcttggcagcttcatggtggcttattggatccg
tttgcgggtttctcaaaaatccgtttggatgcgggttacaccgactatcaacatgctgaa
gaggaaaatggcgatgctgataccttcttctataacaagcagactgaagctcgcttaacc
ctgaacaataacccttgggcagaatggcaaggctcgatgggcttacatgttacccatcgt
gattttgaagtggatggtgaagagcagctaacacccaacagcaaaaccgacacgcttgcc
gcttttattgtgcaagagcgtaaagtggacgacttccgctttgagttgggcgcacgggtt
gaacattacaagcttgatccagcgcagatgagcctagatacccttacgggtgaagccgaa
taccaacctaacagcatcagcgataccaacgtcactgcctctgcgggtgtagtgtgggat
tttcacccgtcgtataacttgagtgtggcactgacccgcgccgaacgttcggccacagcg
gaagagctctacagctatggtccacatgatgcgacccagagtttcgaaattggctctgaa
ttccagatcgtggacggcaatattgtgaccaatgcggccaacgctgaaaaagaaattgcc
aacaacatcgacgtcaccctgcgtaagctggacggcgcttggaccggcagcatcagcatg
gcctataaccgcgttgacaacttcttctatgaggccaataccggcttagtggcggccgat
ttaatcgccagtgatgaagaaggcgatatgccagtctaccaatatcagcaaggggatgcg
cagctgttctcggttgaagctcaagcaagtattccgtttaacgatacatggtcgcttgag
atgtttaccgactacacccgcgccaaactggtggatggcggcaacttgccacggatttca
ccgatgcgctttggctcaacactgaactttgaccaagcgcaatggcacgctgaagccggt
atggtggcctatgccaaacaggataaaacagccgaaaacgaaactgataactcaggctat
gcgttagtgaatgcagcggtgacctatcggatctacaccgataacggcgatctgtttgtt
taccttaaaggcaataacctcaccgatagagaagcacgcccacatacctcgctattgaaa
gattatgcaccattgatgggacgtaatgtgatgttaggtatcaactacaacttctaa
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