Shewanella avicenniae: JYB87_05420
Help
Entry
JYB87_05420 CDS
T07845
Symbol
clcA
Name
(GenBank) H(+)/Cl(-) exchange transporter ClcA
KO
K03281
chloride channel protein, CIC family
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_05420 (clcA)
Transporters [BR:
savi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYB87_05420 (clcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
DUF3169
Motif
Other DBs
NCBI-ProteinID:
QSX34677
LinkDB
All DBs
Position
1228683..1230134
Genome browser
AA seq
483 aa
AA seq
DB search
MPRFANLHFPSMGLIRHRLTPGFFTSQPDYLVLLSLSALVGAVAGLIVSAFEGAIHFLTY
HRLHYFDSWALPAGITALLVILAGALFAAVGFLATAKLAPETSGSGIPHVEGALDGLHDI
RWWRVLPVKFFAGALTLSSGMVLGREGPSVQIGGAVGRMCASLASKYPYAPHVLTASGAA
AGLAAAFNAPLAGILFIIEEMRPQFRYNFTSFKCVTLASLTATIVLRYFHGQDAVMDIPT
FKVPPLESLWLFLLLGVIFGVVGISFNRWVLKWTAFFKGYHRNNLRRVAGTGAMLGGLFA
LFQLYLPDISGGGVALITDFVREPMAWGLMVLVFLVRIVATLGCFSSGAPGGVFAPMLAL
GTLLGLAYGTVAAGLFPSLVAEPGVYAVAGMGALFAATVRAPVTGIILVVEMTDNYQLIM
PLLMTTLGATFIAQAFGGSPLYSALLQQSLSTNAPAKEPEKPQTADIAAPATAAELNAPA
KSE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcctagatttgccaacctgcatttcccgtcgatgggactcattagacatcgactcact
cccggctttttcacatctcaacctgactacttagtgttgttatcgctctccgcactggtg
ggtgctgtcgcaggcttaatcgtctcggcatttgaaggtgcgattcattttttaacttat
catcggctacattactttgatagctgggctcttcctgcgggcattaccgcgttactggtg
atccttgctggtgcgctatttgcggcagtgggctttttggctacggccaagttagcgcca
gaaacctctggcagcggtattccccacgtggaaggggcgctggatggcctgcacgacatt
cgctggtggcgggtattaccggtgaagttttttgcgggtgcactgacgttaagttcaggt
atggtgcttgggcgtgaagggccttcggtacaaattggcggcgcggtagggcgcatgtgc
gccagtttggcgagcaagtatccctatgcgccgcacgtgctcaccgcatctggcgccgcg
gcgggtttagccgccgcatttaatgcgccattggcgggcattctatttattatcgaagag
atgcgcccacagtttcgctataacttcacttcatttaaatgcgttactttagcctcgctt
accgccactatcgtgttgcgttattttcatggccaagacgcggtcatggatatccccacc
tttaaagtgccgccgctggaatccttgtggctgttcttgttgctcggggtcattttcggg
gtggtggggattagttttaaccgttgggtgttaaagtggaccgcattttttaaaggctat
catcgcaataacttacgtcgcgtggcgggcactggcgccatgttaggtggtttatttgca
ctgtttcagctctatctgccggatatttcaggtggtggtgtcgcactcatcaccgacttt
gtgcgtgagccgatggcgtggggcttgatggtgctggtgtttttagtgcggattgtcgca
acgcttggctgtttctcgtccggtgccccgggtggcgtgtttgcgccaatgttggctttg
ggcacgctgttaggtctggcttatggcacagtagcggcaggattattcccgtcactggta
gcggaaccgggcgtgtacgcggttgccggaatgggcgcgttatttgctgcaacggtaaga
gcacccgtcaccggcatcattttggtggtcgaaatgaccgacaactaccagcttattatg
ccgttgttgatgactacactcggcgcaacctttattgcgcaagcgtttggtggaagtcca
ttatattcagcgttattacagcagtcgttgtcgaccaatgcgccggccaaagagccggaa
aagccacaaacagctgatatcgctgcgcccgccaccgccgctgaactcaacgcacccgcc
aaaagtgaatag
DBGET
integrated database retrieval system
