Shewanella avicenniae: JYB87_05455
Help
Entry
JYB87_05455 CDS
T07845
Name
(GenBank) tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
savi
Shewanella avicenniae
Pathway
savi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYB87_05455
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
savi01007
]
JYB87_05455
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_05455
03029 Mitochondrial biogenesis [BR:
savi03029
]
JYB87_05455
Enzymes [BR:
savi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
JYB87_05455
Amino acid related enzymes [BR:
savi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
JYB87_05455
Transfer RNA biogenesis [BR:
savi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JYB87_05455
Prokaryotic type
JYB87_05455
Mitochondrial biogenesis [BR:
savi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JYB87_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
S4_2
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
QSX34684
UniProt:
A0ABX7QTT8
LinkDB
All DBs
Position
1235020..1236219
Genome browser
AA seq
399 aa
AA seq
DB search
MANLAQVMAEIKRGTEEILLESDLLEKLKEGRPLKIKLGADPTAPDIHLGHTVILNKLRL
FQELGHEVIFLIGDFTGMVGDPSGKNSTRPPLTREQVTANAETYKQQVYKILDPVKTRIE
FNSSWLEALGAAGMIRLASHQTVARMMERDDFKKRYAAGQSIAIHEFMYPLLQGWDSVAL
HADVELGGTDQKFNLLMGRELQKAEGQKPQAVIMMPLLEGLDGVKKMSKSSGNYIGVSEA
PDEMFGKLMSISDELMWRYFELLSFRPLTEIDSFKQQVAEGANPRDIKILLAKEIIARFH
DEAAADSAEQNFINRFQKGALPDDIPEVTLAGGAEGVALANLLKDAGLVGSTSDAMRMVK
QGAVKIDGDKAEDAKQIFAVGTTAVFQVGKRKFAKVTIS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttagcgcaagtaatggcagaaattaaacgcggtacagaagaaattctgctg
gaatccgatttgttggaaaagctgaaagaaggtcgtccgctgaagatcaagctgggagct
gacccaactgcgccagatatccacttgggccatactgttatcctcaacaagctgcgctta
ttccaagagttaggccatgaggtgatctttttgattggtgacttcactggcatggttggc
gacccgagcggtaaaaatagcacccgtccaccgttgacgcgcgagcaagtgactgccaat
gctgaaacctacaagcagcaagtttataaaattctcgacccagtcaagacccgtattgag
ttcaactcctcttggttagaagccttgggtgcagcgggcatgatccgtctggcgtcacat
caaaccgttgcgcgtatgatggaacgtgatgactttaaaaagcgttatgctgctggtcag
tcgattgccattcatgagtttatgtacccattgctacaaggttgggattcggtcgcgctg
catgctgacgtagagttgggcggtaccgatcaaaagttcaacttgttgatgggccgtgag
ctacaaaaagccgaagggcagaagcctcaagccgtgatcatgatgccattgctcgaaggt
ttggacggcgtgaagaagatgtccaaatcatcaggcaactacattggcgtgagtgaggcg
ccagatgagatgtttggtaagctgatgtcgatttctgacgagttgatgtggcgttacttt
gagttgttgtcattccgtccgttgactgaaatcgacagcttcaaacagcaagtggcagaa
ggcgctaacccacgcgatattaagattttactggcgaaagagattattgcgcgcttccac
gatgaagctgcggctgacagtgccgagcaaaactttattaaccgcttccaaaaaggtgca
ctgccagatgatattccagaagtgaccttggctggcggtgctgaaggggtggcattagcg
aacctgctgaaggatgccggtttagtcggttcaacttcagatgcaatgcgtatggtaaaa
caaggtgcggtgaagattgacggcgataaagccgaagatgctaagcaaatctttgcggtg
ggcaccactgcagtgttccaagtgggtaagcgtaaatttgccaaagtcactattagctaa
DBGET
integrated database retrieval system
