Shewanella avicenniae: JYB87_05955
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Entry
JYB87_05955 CDS
T07845
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
savi
Shewanella avicenniae
Pathway
savi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYB87_05955 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
savi01007
]
JYB87_05955 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_05955 (alaS)
Enzymes [BR:
savi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
JYB87_05955 (alaS)
Amino acid related enzymes [BR:
savi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JYB87_05955 (alaS)
Transfer RNA biogenesis [BR:
savi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JYB87_05955 (alaS)
Prokaryotic type
JYB87_05955 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
QSX34777
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All DBs
Position
1347060..1349681
Genome browser
AA seq
873 aa
AA seq
DB search
MYKTTAAVRSAFLEYFSKHGHQVVDSSSLVPGNDPTLLFTNAGMNQFKDVFLGMDKRSYN
RATTAQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIKFAWGFLTEVLQ
LPKEKLCVTVYQNDDEAFDIWNKQIGIPAEDIIRIGDNKGAPYASDNFWQMGDTGPCGPC
TEIFYDHGAHIWGGRPGTPEEDGDRFIEIWNIVFMQFNRQADGEMLPLPKPSVDTGMGIE
RISAIMQGVHSNYEIDVFKTLIAKAAEIIGVTDLEAKSLRVIADHIRSCAFLVADGVMPS
NEGRGYVLRRIIRRAVRHGYKLGATETFFYKLVPSLIEVMGDAAKELNALQTVVEKALKA
EEEQFARTLERGLGILDSALAELDGKVLDGETAFKLYDTYGFPVDLTADVCRERDITVDE
AGFDVAMEAQRKRAQAAGQFGADYNAGLKTDADSEFCGYQATTAEGKVVAIFVDGAEVEG
LLPDQEAVVVLDKTPFYAESGGQVGDKGELTAGDSLFEVVDTQKFAAAIGHKGTLKSGSL
KVGQTVAAVVNKKLRHRTELNHSVTHLLHAALRQVLGTHVAQKGSLVQPERLRFDFSHFE
AVKPEELKQVEDLVNTQIRRNHQLQVAEMDIEQAKEQGAMALFGEKYDTTVRVVTMGDFS
IELCGGTHVTRTGDIGVFKIVSEGGIAAGIRRIEAVTGAAAMAYIAEQQQELHDAAALLK
SDAHTVVAKLKAQLEHSKLLEKEIAQLKSKLAAAASADLVSEAQDISGVKVLIKQLDGVD
AGALRGLQDEIKQKLGSGIVVLGIAADDKVNLIAGVTKDLVGKVKAGELVAMVAAQVGGK
GGGRPDMAQAGGSEPENLPAALASVTEWLAAKL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaaccaccgccgccgttagaagcgccttcctggagtatttcagcaagcatggt
catcaagttgttgatagtagctcgctcgtaccggggaatgacccaaccttgttgttcacc
aatgcggggatgaaccagtttaaagatgtattccttggtatggacaaacgcagttacaac
cgtgcgacgactgcacagcgttgtgttcgtgctggtggtaagcataacgatttggataat
gtgggttacacggcacgtcaccatacgttctttgaaatgttaggtaacttcagtttcggt
gattattttaaagaagatgccatcaaattcgcttggggctttttaaccgaagtactgcaa
ctgccaaaagaaaaactgtgcgtgactgtgtatcagaacgatgacgaagcgtttgatatt
tggaataagcagattggtattccagcagaagacatcatccgtattggcgacaataaaggt
gcaccttatgcgtcagataacttctggcagatgggtgacacaggtccttgcggtccatgt
actgagattttctatgatcacggcgcacatatctggggtggccgtccaggcaccccagaa
gaagacggtgaccgttttatcgaaatttggaacatcgtatttatgcagttcaaccgtcaa
gctgacggtgaaatgttacctctgccaaaaccatccgtggatacaggcatggggattgaa
cgcatttcggcaattatgcagggcgttcactcaaactatgaaatcgatgtattcaaaacc
ttgattgcaaaagctgctgaaatcatcggcgtaactgatttagaagcgaaatctctgcgt
gtgattgctgaccatatccgttcttgtgcattcttagtggctgatggcgtgatgccgtcg
aacgaaggccgtggttatgtgctgcgtcgtattattcgtcgcgctgtgcgccatggttac
aagttgggtgcaaccgaaaccttcttctacaaattagtgccgtcattgattgaagtgatg
ggcgatgcagccaaagaactaaacgcactccaaactgttgtcgaaaaggcgttgaaagcc
gaggaagagcagtttgctcgcacactggaacgtggtttgggcattcttgatagtgcgctt
gccgaactagatggcaaggtgctcgatggtgaaacagcgttcaaactttatgacacttac
ggttttcctgtcgacctgaccgctgacgtatgccgcgagcgtgatattactgtcgatgaa
gccggctttgatgtggcaatggaagcacagcgtaaacgcgcgcaagcagctggccaattt
ggtgctgactataacgctggcttaaaaactgacgctgattcagaattctgtggttatcaa
gcgactaccgctgaaggtaaagtcgtagcgatttttgttgatggcgccgaagtagaaggt
ttgctgcctgatcaggaagcggttgtcgtgttggataaaaccccattctatgcagaatca
ggcggccaagtgggtgacaaaggcgaactaacagccggtgacagcctgtttgaagtcgtg
gatacccaaaaattcgccgctgcgattggccataaaggtaccttaaaatcaggtagctta
aaggttggtcaaaccgtagccgccgtagtgaataaaaagctacgtcaccgcaccgaactt
aaccactcagtgacgcacttattgcatgccgcactccgtcaggtgctggggacccatgtt
gctcagaaaggctcattggtgcagccagaacgtttgcgttttgacttctcgcactttgaa
gcggttaagcctgaagaactgaaacaagttgaagacttggtaaacacccagatccgtcgt
aaccatcaactgcaagtggcagagatggatattgaacaagccaaagaacaaggtgcgatg
gcactgtttggtgaaaaatatgacaccacagtacgcgttgttaccatgggtgacttctct
atcgagctgtgtggcggtactcacgtcacccgcacaggtgatatcggtgtgttcaagatc
gtatcagaaggcggtattgctgcgggtattcgtcgtattgaagcagtcactggcgctgcg
gctatggcatacatagccgaacaacagcaagaactgcatgacgcagcggcgttgttgaag
agtgacgcccacaccgttgttgctaaactgaaagcacaattggagcacagcaagctgttg
gaaaaagagattgctcagctgaaatctaagttagctgcggccgcaagtgcagacttagtg
tctgaagcgcaagatattagtggtgtgaaggtgctgatcaagcaacttgacggcgttgat
gctggcgcgctgcgtggtttgcaagatgaaatcaagcagaagttaggctctggcattgtg
gtgctgggcattgctgctgatgacaaggttaacttgattgctggtgtgaccaaagacctc
gtgggtaaagtgaaagccggtgagttggttgcgatggttgctgcgcaggtgggcggtaaa
ggcggtggtcgtcccgatatggcacaggctggtggctctgaacctgaaaacctccctgcg
gcattagcatctgtcactgagtggttagctgctaagttataa
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