Shewanella avicenniae: JYB87_06355
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Entry
JYB87_06355 CDS
T07845
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
savi03009
]
JYB87_06355 (der)
Ribosome biogenesis [BR:
savi03009
]
Prokaryotic type
GTPases
JYB87_06355 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
SRP54
Ras
AAA_22
cobW
AAA_24
TniB
NOG1
Motif
Other DBs
NCBI-ProteinID:
QSX34842
UniProt:
A0ABX7QTN1
LinkDB
All DBs
Position
1436307..1437773
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AA seq
488 aa
AA seq
DB search
MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGHEFIVVDTGGI
DGTEEGIETKMAEQSLAAIEEADVVLFITDARAGLTAADQAIAQHLRSREKVTFVVANKV
DGIDGDSASAEFWGLGLGEVYQMAAAHGRGVTQLIEQALAPYAEEVNAEEGEDAEEVVDE
RLYTEEEAESEQERLRALPIKFAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIYI
PMERDEQEYVIIDTAGVRRRAKVHDTVEKFSVVKTLKAVEDANVVLLVIDAREGIAEQDL
GLLGFALNAGRALVIAVNKWDGIDTDVKDRVKTELDRRLGFIDFARIHFISALHGTGVGH
LFESINEAYESATRRVSTSKLTKIMQMAQDDHQPPLINGRRVKLKYAHIGGYNPPVIVVH
GNQVSRLPDSYKRYMTNYYRKSLNVVGSPIQMRFQEGDNPFEGKVEKLTLSQARQRQRML
GAIKNRKS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcgttgccctggtagggcgcccaaacgtcggtaaatcgactctgtttaac
cgcctcacccgtacgcgggatgcgttggtggccgattttccaggactgaccagggaccgt
aaatatggccgtgctttcttatctgggcacgagttcatcgtagtggataccggtggtatt
gatggtaccgaagaaggtatcgaaaccaagatggccgagcagtcgctggcagcgattgaa
gaagcggatgtggtgttgtttatcaccgatgcgcgcgccggattaactgcagccgatcaa
gcgattgctcaacacttgcgttcacgtgaaaaagtgacctttgtggtcgcaaacaaagtc
gacggcattgatggtgactcagcctcagcagaattctggggcttagggcttggcgaagtc
tatcaaatggctgccgcgcatggccgtggggttacccaactgattgaacaggcgttagcg
ccgtacgctgaagaggtgaatgctgaagagggcgaggacgcggaagaggtggttgatgaa
cgcctttataccgaagaagaagccgaatctgagcaggaacgtctgcgtgcactgccaatc
aaatttgccatcattggtaagccaaacgttggtaagtcaacgctaaccaaccgtattctc
ggcgaagagcgcgtggtcgtatatgaccaaccgggcaccacccgtgactcaatctatatt
ccgatggaacgcgatgagcaagaatacgtcatcatcgacaccgccggtgtgcgtcgtcgc
gccaaagtacacgacacagttgagaaattctcggtcgtaaaaacgctgaaggcggtagaa
gatgccaacgttgtgttgctggtcatcgatgcgcgcgaaggcattgccgagcaagacctt
ggcttgctcgggtttgcgttgaacgctggtcgtgcgctggtgattgcggtgaataagtgg
gacggtatcgataccgacgttaaagatcgagttaaaaccgaacttgaccgtcgcttgggc
tttatcgattttgctcggattcactttatctccgcgctgcacggcacgggtgttggccac
ttgtttgagtcaatcaacgaagcttatgagagtgcaacccgtcgcgtcagtacctctaag
ctgaccaagatcatgcaaatggcgcaggatgatcaccagccaccattgatcaatggccgt
cgtgtgaagctcaaatacgcccatatcggcggttataacccgcctgtgattgtggttcat
ggtaatcaagtttcgcgtctgcctgactcgtacaagcgttatatgaccaactactaccgc
aagtcgctgaatgtggtgggttcgccgattcaaatgcgtttccaagaaggtgataacccg
tttgaaggcaaggtagaaaagttgaccctgagccaagcaagacaacgccaacgtatgtta
ggtgcgattaagaatcgtaagtcttga
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