Shewanella avicenniae: JYB87_06405
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Entry
JYB87_06405 CDS
T07845
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
savi
Shewanella avicenniae
Pathway
savi00190
Oxidative phosphorylation
savi01100
Metabolic pathways
savi02020
Two-component system
Module
savi_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JYB87_06405 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYB87_06405 (cydB)
Enzymes [BR:
savi01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
JYB87_06405 (cydB)
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GFIT
Motif
Pfam:
Cyt_bd_oxida_II
PaaX
DUF4736
Motif
Other DBs
NCBI-ProteinID:
QSX34851
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Position
1452533..1453690
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AA seq
385 aa
AA seq
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MFDYEILRFVWWALLGVLLIGFAVTDGFDMGVGALLPIVGKDDTERRVMINSVAPHWDGN
QVWLITAGGALFAAFPTVYAVSFSGFYVAMILVLACLWLRPVGFDYRSKIEAPKWRKTWD
WCLFAGGFVPPLVIGVAFGNLLQGVPFQFDEYLRAYYGEPGTNWLLNLIYLLNPFGLVAG
LISAGMFMTQGACWLQMKTDGEVRARASKMAQLLSIVVLVLFVVAGFWVSGMDGYVLTSA
IDGNAVSDPTVKQVAVQAGAWMANYEKYPLTWIFPILGVAAAALTFLTSRLNRAGFAFLF
SSLTIAGVILTCGVAMFPFVMPSSLVPNVSLTMWDATASQMTLTVMTYVAIVFVPIVLGY
TLWTYFKMFGRVTREHIEANSTSLY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattacgaaattttacgatttgtctggtgggcactgctcggcgtactgctgatc
ggcttcgctgtgacagatggctttgatatgggcgtgggtgccttgctgccaatcgtgggc
aaggatgacactgagcgtcgtgtgatgattaactctgttgcaccgcactgggatggtaac
caagtttggttgatcactgccggtggtgcactgtttgctgcattcccaactgtctatgct
gtatctttctctggcttctatgtggctatgattctggtattagcatgtttgtggctgcgt
ccagtgggcttcgattaccgttcaaaaatcgaagcaccaaaatggcgtaaaacttgggat
tggtgtctgtttgccggtggttttgttccgccattggttatcggggtcgctttcggtaac
ttgctgcaaggtgtaccgttccaattcgacgaatatctgcgtgcttactacggcgaacca
ggtactaactggctgctgaacctgatctatctgctgaatccgtttggtttggtagcgggc
ttgatcagtgctggtatgttcatgactcaaggtgcttgttggttgcaaatgaagactgat
ggcgaagtgcgtgctcgcgcttcaaaaatggctcagctgctgtcaatcgtcgtgttggtg
ctgtttgttgtcgcaggcttctgggtaagcggtatggacggttatgtgttgacctcagcg
attgatggcaacgcagtgtctgatccaacagtgaagcaagttgcggttcaagctggtgcg
tggatggctaactatgaaaaatacccactgacttggattttcccaatcttgggtgttgct
gctgccgcgttgacattcctgactagccgtttgaatcgtgctggctttgcattcttgttc
agctcactgaccattgctggcgtgatcctgacctgtggtgtagcaatgttcccattcgtg
atgccgtcatcactggttccgaacgtgagtctgaccatgtgggatgccactgcaagccaa
atgacactcacagttatgacctatgtagcgattgtattcgtacctatcgtactgggttac
acgctgtggacttacttcaagatgtttggacgcgtaactcgcgaacacatcgaagctaac
agcacttcactgtactaa
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