Shewanella avicenniae: JYB87_07085
Help
Entry
JYB87_07085 CDS
T07845
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_07085 (truA)
Enzymes [BR:
savi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JYB87_07085 (truA)
Transfer RNA biogenesis [BR:
savi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JYB87_07085 (truA)
Prokaryotic type
JYB87_07085 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QSX34976
UniProt:
A0ABX7QVL3
LinkDB
All DBs
Position
1611404..1612186
Genome browser
AA seq
260 aa
AA seq
DB search
MRIALGVEYDGNGFYGWQRQSEVESVQGHLERVLSKIADEPIEVQCAGRTDAGVHATGQV
VHFDTQAERNIGAWTLGVNANLPDNVAVRWAKVVDDSFHARFSATARRYRYIIYNHNYRP
GILRHGVSHYHGELDEQRMHRAAQHLLGENDFTSFRAVQCQSRTPFRNVHRVDVSRRGNF
VIVDISANAFLHHMVRNIVGSLLEVGYGNQEEQWIADVLALKDRTKAAATAKPHGLYLVD
VTYPEQFALPKPPLGPLFLE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcgttaggcgtcgagtatgacggcaatggtttttacggttggcagcgacaa
tcagaagtagaatcggtgcaagggcacttagaacgagtgttatcaaaaattgccgatgaa
ccgattgaggtacagtgtgctggccgtactgatgcaggtgttcacgccaccggccaagtg
gtgcacttcgacacgcaagcggaacgaaatatcggtgcttggacgctgggcgtaaatgcc
aatctgcctgataacgtcgcggtacgttgggcgaaagtggttgacgatagtttccacgcg
cgtttctctgccaccgcacgccgttatcgctacatcatttataaccataactatcgcccc
ggtattttgcgccatggcgtcagccattatcacggtgaactagatgagcaacggatgcac
cgcgccgcacagcatctgttaggtgagaatgactttaccagttttcgtgcggtgcaatgt
cagtctcgcaccccatttcgtaacgtgcatcgtgttgatgtcagtcgtcgtggtaatttt
gtaattgtcgatatctcggccaacgcatttttacatcatatggtgcgcaatattgtcggt
tcgttattagaagtgggttatggcaaccaagaagagcaatggattgccgatgtgctcgca
ctgaaagaccgtactaaagccgcagccaccgccaaacctcatggtctttatttagttgac
gtgacgtatcctgagcagtttgctttgcccaagccgccattaggcccgttgttcctagaa
taa
DBGET
integrated database retrieval system
