Shewanella avicenniae: JYB87_07220
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Entry
JYB87_07220 CDS
T07845
Name
(GenBank) DEAD/DEAH box helicase
Organism
savi
Shewanella avicenniae
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Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PhoH
AAA
Methyltransf_17
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
QSX35000
UniProt:
A0ABX7QWH1
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Position
1640669..1643212
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AA seq
847 aa
AA seq
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MTNISRSQREIVNNLLKIEHKNYAATLGLIDTPTIHLERKELAEAISVVDRLSRNDQEFA
KRVAILTIALSWEYSNKDYKDSLREIFITALTRMGIAPSTVLVDENYKNEGIYSPFSSYI
NKLSVIANQLKYEVNINDKAYLLTDFQKSVWDSIDTNKIVCISAPTSAGKSFSIYLKIIQ
KLTQEYKKIVYVVPTISLVNQVTTDLSCLVKEFNLNDTEIFTHIQEVQPEKYIYVLTQER
AISGFSEEAHFENLDMLVVDEIQNIERVANDGDQRSKILYDFLKEIKHQTNTKRIILSGP
RLKNIGNLGFDIFNEVSYEAETKVPPVVNITYSVSKFNGKFYFNQYSDIAEEPNSIVIQY
NEKIKGLGGTQYNDNFHSYLDFILGRISNKSNLIFSPTANQARKTAIYLSNNAHAKNREK
VESLAEYIAEFVHKDYDLVRLVRQGVAYHTAKLPLHIRSAIEDSFSNGIINNIVCTTTLM
QGVNFPASNIIVRNPYLFTKRMKNRENVKLSNYEFSNLRGRAGRLLKEFIGRTIVLDESS
FEIEQENETLFEHTEKELSTGYGEYYEKFKENIDNSIGNDSFVEDGKEKHLITYIRQTIY
RHRENSYSRLQEVGINISKEQIQKNIETLDALNVPSGVVYNNRYWDPYDLDIIYNELRSN
KICKLPANIWDSGTLDSLKSATITFSQIMPYYFNKFISNPTKDSEQLDKYIWSICKYATD
WGRENLLRDILMERNFSNDASDQIDKAVQTISSKVCFGLPMLLKPLSDMSEDENSILSII
ENGAYSKITKYLIAKGIPRDTAIYIKQTALVDIDQEDPDYRQIQKRISDLRGHISPWIFS
QIESAGT
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgactaatatatcccgctcgcaaagagaaattgtgaacaatcttttaaagattgaacat
aaaaattacgcagctacgctaggattgatcgatactcctacaattcatcttgagagaaag
gagttggcagaggctatatcggttgttgacaggctgtcgagaaacgatcaagagtttgca
aagcgtgtagcaatattgacaattgctttatcatgggaatactcaaacaaagattacaaa
gactcattgcgagaaatatttatcacagcattgactcggatgggtatagctccatcaaca
gtattagttgatgagaactacaaaaatgaaggtatctacagcccatttagtagctatatc
aacaaactctcagttattgcaaatcaattaaagtatgaagttaatattaatgacaaagct
tacctactaacagattttcaaaagagtgtttgggattctatcgacaccaacaaaattgtt
tgtatatcagctccaacatcagctggtaaatcattctcaatatacttaaaaataattcaa
aagctgacgcaggaatataaaaaaatagtatatgttgttcctacaataagtcttgtgaat
caggtgactacagatctttcatgcttggtcaaagaatttaatcttaatgacactgaaata
tttacacacattcaagaagtacagccagaaaagtatatctatgtattaacacaggagaga
gctatttcaggattcagtgaagaagctcacttcgagaatttagatatgttagttgtagat
gaaattcaaaatattgaacgtgttgcaaatgacggtgatcagaggtcgaaaatattatat
gactttctaaaagagataaaacatcagaccaatacgaagaggattattctaagtggccct
aggctaaaaaatataggaaacctcgggtttgatatatttaatgaagtctcatatgaagca
gaaacaaaagtaccaccagtagtcaatattacttattcagtgtcaaaattcaacgggaag
ttttatttcaatcaatacagtgatattgccgaagagccaaattctattgtcattcagtac
aatgaaaaaattaaaggattaggaggtacacaatacaatgataacttccatagctattta
gactttatactcgggcgcataagtaataaaagtaatttaatattttcaccaacagctaac
caagcacgaaagacagccatttatctgtccaataatgcacatgctaaaaatagagaaaaa
gttgagtcgcttgctgaatatattgcagagttcgttcataaagactatgacttggttaga
ctagtacggcaaggcgtcgcttatcatacagctaaactcccacttcatattcgatctgct
atagaagactcattttcaaatggcatcataaataacattgtttgtacgacaacactgatg
cagggtgttaatttcccggcttcaaacataattgtaagaaatccatatctatttactaag
aggatgaaaaacagagagaatgttaaactatcaaactatgaattttcaaacttacggggt
cgagctggaaggcttctaaaagaatttattggtagaacaatcgtacttgatgaatcttca
tttgaaatagagcaagagaacgaaactctttttgaacacaccgaaaaagagctgagtaca
ggctatggtgagtactacgagaaatttaaagaaaatatagataattcaattggaaatgat
tcttttgtagaagatggaaaagagaagcatctcatcacctatattagacaaacgatatat
aggcatagagaaaatagctattcacgcctgcaagaagtaggcattaatataagtaaagaa
caaatacaaaaaaatatagagactctagatgctttgaatgtcccttctggggttgtgtat
aataacaggtattgggatccatatgatcttgatatcatatataacgagctcagaagtaac
aaaatttgtaagttgcccgccaatatatgggatagtggtacccttgattctctaaaaagc
gcaactataacattttcacaaatcatgccttattactttaataagttcatttcaaatcca
actaaagatagtgaacagttagataaatatatctggagtatctgtaagtatgctacagac
tgggggagggaaaatcttcttcgagatatattaatggagcgtaacttttctaatgatgct
agtgatcaaatagataaagcagtgcaaactatctcatcaaaagtgtgttttggtttgcct
atgttactcaaaccattatcggatatgtctgaagatgaaaactccatacttagtattatt
gaaaatggagcttacagtaagatcaccaaataccttattgcaaaaggaattccgcgagac
actgctatttacattaaacaaactgctttggtagatattgatcaagaagatcctgattat
cgtcaaatacagaaaagaatatcagatttaagaggtcatatctcaccttggatattcagt
caaatcgaaagtgcaggcacgtaa
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