Shewanella avicenniae: JYB87_07540
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Entry
JYB87_07540 CDS
T07845
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
savi03009
]
JYB87_07540 (rluC)
Enzymes [BR:
savi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
JYB87_07540 (rluC)
Ribosome biogenesis [BR:
savi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB87_07540 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
TGS
Motif
Other DBs
NCBI-ProteinID:
QSX35061
UniProt:
A0ABX7QWM2
LinkDB
All DBs
Position
1712025..1712987
Genome browser
AA seq
320 aa
AA seq
DB search
MTNNESQFQQVQLLTIDEDNLGQRIDNFLLAKLKGVPKSMIYRIVRKGEVRVNKKRIKPE
YKLQEGDVVRVPPIRVSEADPRTAPSPKLQRVAQLEDRILFEDKHIIVMNKPAGIAVHGG
SGVDYGLIEGLRSLRPQQKFLELVHRLDKETSGVLLVAKKRSALRHLHDQLRNKQMQKDY
LALVRGAWQAHDRVVKAPLLKITLPHGERIVRVNAEGKPSETRFKILQRYEQATLIQASP
VTGRTHQIRVHCQFAGHPIACDEKYSEQAFDDAMRALGLNRLFLHAAQLRFTHPESEQVL
EVQAPLDDELQQLLDKLKKC
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataacgaatcccagtttcagcaggtgcaactgctgaccatcgatgaagacaat
ctcggccaacgtattgataacttcctgttagcgaagttaaaaggcgtgcctaaaagcatg
atctatcgcatcgtgcgtaaaggtgaggtacgggtaaataaaaagcgcattaaaccagaa
tataaactgcaagagggtgatgtggtacgcgtgccacctattcgggtgagcgaggccgat
ccccgcacggcgccatcgcctaaattgcagcgcgttgcccaacttgaagatcgcattctg
tttgaagacaaacatatcattgtgatgaataagcctgcgggtattgcggtgcacggtggc
agtggcgttgattatggtttgattgaaggtttacgttcactcagaccacaacagaagttt
cttgagttggtgcaccgcctagataaggaaacttccggcgtactgttagtggctaaaaag
cgcagtgcgttacgtcatctgcatgaccaattgcgtaataagcagatgcagaaagattat
ctggctttggttcgtggcgcatggcaagcccatgatcgcgtagttaaagcaccactgctg
aagatcaccttgccccacggcgaacgcattgtgcgagtgaatgctgaaggtaagccgtca
gagacacgttttaagattttacagcgttacgagcaggcaaccttgattcaagcgagtcca
gtgaccggtcgtactcatcaaattagggtgcattgccaatttgccggtcatcccattgcc
tgtgatgagaaatacagtgagcaggcatttgatgatgcgatgcgtgcacttggactgaac
cggttgtttttgcatgccgcgcaattacgtttcacccatccagagtctgaacaagtactt
gaggtgcaagcaccgctggatgatgagctgcaacagttactcgataaactgaaaaaatgt
tag
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