KEGG   Shewanella avicenniae: JYB87_07740
Entry
JYB87_07740       CDS       T07845                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
savi  Shewanella avicenniae
Pathway
savi03030  DNA replication
savi03430  Mismatch repair
savi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:savi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JYB87_07740
   03430 Mismatch repair
    JYB87_07740
   03440 Homologous recombination
    JYB87_07740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:savi03032]
    JYB87_07740
   03400 DNA repair and recombination proteins [BR:savi03400]
    JYB87_07740
Enzymes [BR:savi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JYB87_07740
DNA replication proteins [BR:savi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JYB87_07740
DNA repair and recombination proteins [BR:savi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JYB87_07740
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: QSX35099
UniProt: A0ABX7QUD0
LinkDB
Position
1752913..1753596
AA seq 227 aa
MASWRHRIGLSYQLWRAQDGLADYYAELSQVLKKDSLAGIPLVAIDLEMTGLNAQIDQII
SVGIVPIEQQRLQMAGAEHRLVAINGSVGQSATIHGIVDRQLQQDVMSQQEMLHWLLQQT
YGKLMVFHHGMLDITFLSKLTEQVFNRPLHLPIIDTLQIEQRRVMRDRHVIEHGSLRLAA
CRKRYKLPIYVAHNALIDAAACGELFLAQTAFNAWSKQPLDDYLFWF
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcaagctggcgacatcgtatcgggttaagctatcagttgtggcgagcgcaagacggg
ttggcggactactatgcagagctaagccaagtgcttaaaaaggactcgcttgcgggcata
ccactcgttgcgattgacctcgaaatgacgggcttgaacgctcaaattgaccaaattatc
tctgttggtatcgtgcctattgaacagcagcgattacagatggctggcgctgagcaccgg
ttagtggctatcaatggcagtgtggggcagagtgcaacgatccatggcattgtggatcgg
caactgcagcaggatgtgatgtcacaacaagagatgctgcattggttgttacaacaaact
tacggcaaattgatggtgtttcatcatggaatgctggatattacgtttctttcgaagctg
acggagcaggtatttaaccggccgctccatttgcccatcattgatacattgcaaattgag
caacgtcgagtgatgcgcgatcgacatgttattgaacacggcagtttacgcttagccgct
tgtcgaaagcgttataaattgccgatttacgtcgcgcataacgcgctgattgatgctgct
gcttgcggtgaattatttttagcgcaaaccgcatttaatgcctggtctaagcaaccgctg
gatgattatttgttttggttttga

DBGET integrated database retrieval system