Shewanella avicenniae: JYB87_08105
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Entry
JYB87_08105 CDS
T07845
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
savi
Shewanella avicenniae
Pathway
savi00030
Pentose phosphate pathway
savi01100
Metabolic pathways
savi01120
Microbial metabolism in diverse environments
savi01200
Carbon metabolism
Module
savi_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
JYB87_08105
Enzymes [BR:
savi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
JYB87_08105
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
QSX35154
UniProt:
A0ABX7QUN4
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All DBs
Position
1822866..1824692
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AA seq
608 aa
AA seq
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MHATIQAVTDRIIARSQEHRGKYLAAIAEAKGQGVHRGKLSCGNLAHGFAACSADDKNAL
LQLTKANVGIVTAYNDMLSAHQPYEHYPQILKQACQEVGSVAQVAGGVPAMCDGVTQGQP
GMELSLISREVIAMATAVGLSHNMFDGALLLGICDKIVPGLLIGALSFGHLPMLFVPAGP
MRSGIPNKEKARIRQKFAQGLVDRAALLEAESKSYHSAGTCTFYGTANSNQLVLEVMGLQ
LPGSSFVNPDDPLRLALTQAAARQVCRLTSLGTDYTPIGEIVNEKSIVNGIVALLATGGS
TNLTMHIVAAARAAGIIINWDDFAELSAVVPLLARVYPNGHADINHFHAAGGMAFLVKEL
LDAGMLHEDVATVAGYGLRRYTQEPKLIDGNLVWVDGPTVSLDTEVLAPIAQAFQPNGGL
KLLKGNLGRAVMKVSAVNPKFRVVEAPAVVIDDQDKLNGLFKAGELNRDCVIVVKGQGPK
ANGMPELHKLTPILGSLQDSGYHVALVTDGRMSGASGKVPAAIHLTPEALEGGLIAKVQN
GDMIRVDAETGEISLLVDDAVIAARQAEEVPLRQVRYGMGRELFSAMRASFSSPETGARS
TSAVDEYY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcaacaattcaggcagtgaccgataggatcattgcccgcagtcaagagcatcgc
ggcaagtacttagctgctattgctgaggcgaaaggacaaggcgttcatcgtggcaaactg
agctgcggtaacttagcgcacggctttgcggcgtgttcggcagatgacaaaaacgcgtta
ttgcaattaaccaaagcaaacgtcggtattgtcacagcctacaacgatatgctttcagcc
catcagccttatgagcattatccgcaaatcctcaagcaggcgtgccaagaagtcggtagc
gttgcacaagttgcagggggtgttcctgctatgtgtgatggtgtcactcaaggtcagccg
gggatggagctaagtctgatcagccgtgaagtgattgcaatggcgaccgcagttggcttg
tcacacaatatgtttgatggtgcgttgctgctggggatctgtgacaagattgtgcctgga
ttgttgattggtgcattgagctttggtcatctgccgatgctgttcgtgccagctggccca
atgcgctccggtattccgaataaagaaaaagcccgtattcggcagaaatttgctcaaggc
ttagtcgaccgtgcggcactgcttgaagctgaatccaagtcctaccatagcgcgggtact
tgtaccttctatggcacggcaaacagtaatcagttagtgctggaagtgatggggttacag
ctacctggttcttcttttgtgaatccagatgatccattacgtctcgcattgacacaagcg
gctgcacgtcaagtgtgtcgtttgaccagcttgggtaccgattacaccccgattggtgaa
atcgtcaatgaaaaatcgattgtcaacggcattgttgcgctgttggcaaccggtggctca
accaacttaaccatgcatatcgttgccgctgcacgtgctgctggcatcatcattaactgg
gatgattttgctgaattgtctgccgttgtgccgctactggcacgggtttatccaaacggg
catgctgacatcaaccatttccacgctgctggtggtatggccttcctcgttaaagaactg
ctggatgccggtatgctgcatgaagatgtggctactgttgcaggatacggtctgcgacgt
tacacccaagagccgaagttaattgatggcaacttggtgtgggttgatggtccaaccgtt
agtttagacaccgaagtactggcgccaattgcgcaagcattccaacccaacggtggcttg
aaactgctgaaaggtaatttgggccgtgcagtgatgaaagtgtctgcggttaatcctaaa
ttccgcgtggtagaagcccccgccgtcgtcattgatgatcaggacaaactcaatggcttg
ttcaaagcgggtgaactcaaccgagattgtgtgattgtggtcaaaggccaagggccaaaa
gccaatggtatgccggaattacacaaactgaccccaattcttggctcactgcaagacagt
ggctatcacgttgccttggtgactgacggccgtatgtctggagcttcgggtaaagtgcct
gcggcaattcatctaacgcctgaagcgcttgaaggtggtttaatcgccaaagtgcaaaac
ggcgacatgatccgtgttgacgcagaaacgggtgagatttcgttattggtcgatgatgct
gttattgcagcgcgacaagccgaagaagtgccattacgtcaggtgcgttacggcatggga
cgcgaattatttagtgcgatgagagccagcttctctagcccagaaaccggtgcgcgcagc
accagtgctgttgatgaatattattaa
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