Shewanella avicenniae: JYB87_08525
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Entry
JYB87_08525 CDS
T07845
Symbol
pyrF
Name
(GenBank) orotidine-5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
savi
Shewanella avicenniae
Pathway
savi00240
Pyrimidine metabolism
savi01100
Metabolic pathways
savi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JYB87_08525 (pyrF)
Enzymes [BR:
savi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
JYB87_08525 (pyrF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
QSX35224
UniProt:
A0ABX7QVC0
LinkDB
All DBs
Position
1921180..1921884
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AA seq
234 aa
AA seq
DB search
MTEKAIVVALDFDNKFKALQLVDKLDPTLCRLKVGKEMFTLFGPDLVKEIHNRGFDLFLD
LKFHDIPNTVAKAVAAAAELGVWMVNVHASGGLAMMEAAKKALLPYGENAPLLIAVTVLT
SMSSEELQLLGINATAPEHVMRLAKLTHQAGLNGVVCSAQEATMLKAAFGEDFKLVTPGI
RPVGADVGDQKRIMTPSKALAAGSDYLVIGRPITQAADPLAALEAIHHSILVGE
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaagcgattgttgtcgcccttgatttcgataacaaatttaaggccttacag
ttagttgataagcttgatcctactctttgccgcttaaaagtgggcaaagagatgttcacc
ttatttgggccagatttagtcaaagaaattcataaccgcggctttgatctatttttggat
cttaagtttcacgatattcctaatacggttgctaaagcggttgcagcagcagcagagctg
ggcgtttggatggtcaacgtgcatgccagtggcggtttggcaatgatggaagcggctaaa
aaagccttgttgccatatggtgaaaatgcaccactgttgattgcggtcactgtactcacc
tccatgagtagtgaagagctgcaactgctcggtattaatgcgacggcgccagagcatgtt
atgcgattggctaaattgactcatcaagccggtttgaatggtgttgtttgctcagctcaa
gaagcgacgatgttgaaagctgcatttggtgaagatttcaaattggtcacccccggtatt
cggcctgttggtgccgacgtaggtgatcaaaaacgaattatgacaccaagcaaagcattg
gccgctggttcggattatttggtcattggtcgtccaattacacaagcggcagatccgtta
gccgcattggaagccattcatcactctatcctagttggggaataa
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