Shewanella avicenniae: JYB87_08560
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Entry
JYB87_08560 CDS
T07845
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_08560
01504 Antimicrobial resistance genes [BR:
savi01504
]
JYB87_08560
Transporters [BR:
savi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYB87_08560
Antimicrobial resistance genes [BR:
savi01504
]
Gene variants
Tetracycline resistance genes
Transporters
JYB87_08560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
DcuC
Motif
Other DBs
NCBI-ProteinID:
QSX35231
LinkDB
All DBs
Position
1929866..1931248
Genome browser
AA seq
460 aa
AA seq
DB search
MSEPTALSLIPPIVVLVCAILLRRPILALIIGAVTGLLLLDPATVLDNFADASLKVMQDE
TIGWLILVCGGFGALIALLVRTGGALAFGRNAIRFAKGPRSSLLMTFILGIVIFIDDYLN
ALTVGETMKRVTDRFKISREMLAYIVDSTAAPVCVIVPVSTWAVFFGGLLVDNGVAAKGE
GIHVYMQAIPYMLYAWLAVLMVLLVAMKIVPAIGPMKKAELAAQAGVPAKEQVDLDEVIT
SDEYALKAMEEEFEAADKQGQLHNFLVPMFMLVGFTVYFDIDVWKGLLATLAITLPYYAV
QKLMPFPEMMDQMIDGFKSMLPAIGTVVAAFVFKDVCDQLLLPQYVIDSLSPYMTATMLP
AVVFLAMAILAFATGSSWGIFAVTIPIVMPLAQSVGADIPLVIGALLSASSFGSQACFYS
DSTVLAAQGSGCNLVSHAVTQLPYALIAAVLAFIGFIVIA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccgacagcgttaagtcttatcccacccattgtggtgttagtatgcgcaatt
ttgttacgccgcccaattttggcattaattattggcgcagtaactgggttgttactgtta
gatcctgcaaccgttctggataactttgccgatgcgtcactgaaagtgatgcaggatgaa
accattggctggttaatcttggtatgtggtggctttggtgccctgatcgcattactagtg
cgaactggcggggcattagccttcggtcgcaacgcgatccgttttgctaaaggcccgcga
tcatcgctattgatgacctttattctaggtatcgtgatttttatcgacgattatctcaat
gcgctcacagtgggtgaaaccatgaagcgggtaaccgatcggtttaaaatttcccgcgaa
atgttggcgtatattgtcgactctactgctgccccagtgtgcgttattgtcccagtctct
acttgggcggtgttttttggtgggctgctggtagataacggcgttgctgcaaaaggtgag
ggtatccacgtttacatgcaggccatcccttacatgctctacgcatggttggccgtgctt
atggtgttgctggttgcaatgaaaattgtcccagcgattggcccgatgaaaaaggctgag
ttggcagcacaagctggtgttccagcaaaagagcaagtggatttagatgaagtcatcact
tcagatgaatatgcattgaaggcgatggaagaagagtttgaggcggcggacaaacaagga
caattacataactttttagtgcctatgttcatgctcgttgggtttactgtttactttgac
atcgacgtatggaaaggcctgctggcaactttagcgatcaccttgccttattatgcggtt
caaaaactgatgccatttcctgaaatgatggatcagatgatcgatggttttaagagcatg
ctacctgcgattggtactgtggttgcagcgtttgtttttaaggacgtatgcgatcaattg
ttattgcctcaatacgtgatcgactcgttgagcccttatatgacagccaccatgttaccg
gcggtcgtatttttggcaatggcgatattggcgtttgctacggggtctagctggggcatt
ttcgcggtaactatccctatcgtgatgccactcgctcaatcggttggcgcggatattcca
ttagtgatcggtgcgttattgtcagcgtcttccttcggtagccaagcttgcttctattca
gattcaaccgtgttggctgcacaaggctcaggttgtaacttagtgagccatgcggtgacg
cagttaccttacgctctgattgccgcggtactcgcattcatcggatttattgttatcgcc
tga
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