Shewanella avicenniae: JYB87_08940
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Entry
JYB87_08940 CDS
T07845
Name
(GenBank) FNR family transcription factor
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
savi03000
]
JYB87_08940
Transcription factors [BR:
savi03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
JYB87_08940
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QSX35297
LinkDB
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Position
2019660..2020409
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AA seq
249 aa
AA seq
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MTTETSKLRRPVSTGCAIHCHDCSMGTLCIPFTLNNNELDQLDNIIERKKPIQKGEQIFK
SGDGLKSLFAIRSGTIKSYTITEQGDEQITGFHLAGDVIGFDGIYTSKHQSFAQALETSM
VCEIPFNTLDELSGTMPKLRQQIMRMMSSEIMTDQGMILLLSKKNAEERLAAFINNLATR
YGERGFSPKEFRLSMTRGDIGNYLGLTVETISRLLGRFQKMNLIEVKGKYITVLDFDALK
TLAGTPIKD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgaaactagcaaactccgccgtccggtctcaacaggttgtgcaattcactgc
catgattgcagtatgggtacgttatgtattccatttacgctcaataataacgaattagat
cagttagataatattattgaacgtaagaagccgatccaaaaaggtgagcaaatttttaaa
tcgggtgatggcttaaaatcattgtttgctatccgttctggtacgattaaaagctacacg
atcaccgagcaaggtgatgagcagatcactggtttccatttggctggtgatgtcattggt
tttgacggtatctacacctcaaaacaccaaagcttcgcgcaagcgctggaaacatccatg
gtctgtgaaattccattcaatactctagatgagttgtctggcaccatgcctaagctgcgt
cagcaaattatgcgtatgatgagcagtgaaattatgaccgaccagggcatgattctgcta
ttgagcaagaaaaacgcagaagaacgtctggcagcattcatcaataacctcgcaacacgt
tacggcgaacgcggcttttcaccgaaagagttccgtttgagtatgacacgtggtgatatt
ggtaattacctaggcttaacggttgaaacaatcagccggttgttggggcgttttcaaaaa
atgaacctcatcgaagttaaagggaaatatatcaccgtcctcgattttgacgcgctgaaa
accctggctggcacaccaattaaagattga
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