Shewanella avicenniae: JYB87_08950
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Entry
JYB87_08950 CDS
T07845
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine(32) synthetase TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_08950 (ttcA)
Transfer RNA biogenesis [BR:
savi03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
JYB87_08950 (ttcA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
GSHPx
Motif
Other DBs
NCBI-ProteinID:
QSX35298
LinkDB
All DBs
Position
2021514..2022455
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AA seq
313 aa
AA seq
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MSDVSELDRKQVTRLNKLQKRLRREMGSAIADYNMIEAGDRVMVCLSGGKDSYTMLDILV
NLQQRAPVDFEIVVVNLDQKQPGFPEDVLPAYLDSLNVPYHILEKDTYSIVKDKIPEGKT
TCSLCSRLRRGTLYGFAHRIGATKIALGHHRDDIIETLFLNMFYGGKMKAMPPKLLSDDG
ANVVIRPLAYCREKDISEYAKLKDFPIIPCNLCGSQENLKRKEVKELLKSWDKQFPGRIE
TIFTAMQNTAPSQGVDREAFDFVSLKKDPTVTMKGDVAEADLPAFDFMDVSNSGHIDLDT
AAKRIDVVEVFQP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgttagtgaactggacagaaaacaagtcaccagacttaacaaactgcaaaag
cggttacgccgcgaaatgggcagtgcgattgctgattacaatatgattgaagctggcgat
cgggtcatggtgtgtctgtcgggtggcaaagacagctataccatgctggatattttggtc
aatctgcagcaacgtgcgccagtagattttgaaatcgtggtggttaacctcgatcaaaaa
caaccgggttttccagaagatgtgttgccagcatatcttgatagtctcaatgtgccctat
catattctggaaaaagacacttactcgattgttaaagacaaaattccagaaggcaaaact
acctgctctttgtgttcgcgcttgcgccgcggcactctgtacggtttcgcgcatcgtatt
ggtgcgacaaaaattgcactcggccatcaccgtgacgacatcattgaaacgttgttcctc
aatatgttttacggcggcaagatgaaagccatgccgcctaagttactgtctgatgatggt
gcgaacgtggttattcgtccactggcgtattgccgcgaaaaagatattagcgaatatgcc
aaactgaaagattttccgatcattccgtgcaacttgtgtggctcgcaagaaaacttgaag
cgcaaagaagtaaaagagctgctcaaaagctgggataagcagtttccagggcgtattgag
accatctttactgcgatgcaaaatactgcgccttcacagggtgttgaccgcgaagccttt
gattttgtctcgctgaaaaaagatcctactgtgacaatgaaaggcgatgtcgccgaggca
gacctacccgcttttgactttatggacgtgagtaacagcggccatattgatttagacact
gccgcaaaacgcattgatgtggttgaagtatttcagccctaa
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