Shewanella avicenniae: JYB87_09015
Help
Entry
JYB87_09015 CDS
T07845
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
savi01011
]
JYB87_09015
Enzymes [BR:
savi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JYB87_09015
Peptidoglycan biosynthesis and degradation proteins [BR:
savi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JYB87_09015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_4
Motif
Other DBs
NCBI-ProteinID:
QSX35311
LinkDB
All DBs
Position
2034615..2036546
Genome browser
AA seq
643 aa
AA seq
DB search
MEIVVSRKQTLIHLAISGVLLSCSALVANEVNATDYTAQRKLYLQAREAQQKNKSEQYQQ
LRQQLNGYPLTLYLDFHDEQDELLKLKGDKAVTELANYAGSPLYGTLKHRYLENAADKRR
WQDFLAISPTAPRSDNLECAFYVAKFQTGQLDEAWKGARALWLSGQSQPKACDPLFDAWS
KAGLRTDEMIWQRIILSFDNGQSRLLSYLVQHAGSYKLSAELLYKVYSDPRELRHIAKFD
KPNSVYADIVRGGLMRLAVKDLTLATNLFDRYRDAGRFNAAQQAELQHFLLYRSLLNREG
KLEQYVDERLAKQPDDVLIAMRIRWALADNNLAIVKQFLPLLTAEEQADSRWLYWRVKLG
LAKDADAKQLLQTRNFYGFTAAFEQGVAPQLQPQAVADIEPDSPLLADAGLLRVIELIAI
DKTIDAKLEWRELMQRHSAEEQIRYGGYALKQGWYDLSVDSSISAKAWDYLALRFPEVQT
TLYDKYSKQFNADKYQLMSIARRESAFYPYATSGAGARGFMQLMPDTAKRTAQRYKLTYN
GTRSLYEPEINIPLGSAYFGGLLKQFDGNRVLATAAYNAGPYRIKQWLKKSAGKLDVMAF
IESIPYRETREYVQGVFSYRMIYEQQQQLNKPFFTEKEYKNTY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgtagtatctcgtaaacagacgttaatccatttggctatcagtggtgtgtta
ctcagctgcagtgctcttgtagccaatgaggtaaacgccactgactacacagcgcagcga
aaactgtatctgcaagcacgtgaagcgcaacaaaaaaacaagtcagaacaatatcagcag
ctcagacagcagctgaacggttacccgctgacgctttatcttgattttcacgatgaacag
gatgagttactgaagctcaaaggtgataaagccgtcaccgaacttgccaattacgctggg
tcgcctttgtacggcacgctcaagcatcgctatttagaaaatgccgcggataaacgacgt
tggcaagatttcttagccatcagtcccacagcgccacgctcggacaacttagaatgcgcc
ttttatgttgccaaatttcaaacaggacaactggatgaagcatggaaaggcgcgcgagca
ttgtggttgagtggacaatcgcaacctaaagcatgcgacccactatttgatgcttggtcg
aaggccggattacgcaccgatgagatgatttggcagcgaatcattttaagtttcgacaac
ggtcaaagccgtttattaagctacctcgtacaacatgcgggtagctataaactctcggca
gagttgctttacaaggtgtatagcgaccctcgcgaactgcgtcacattgccaaatttgat
aagcctaattcagtttatgccgacatagtgcgcggtggcttaatgcgcttagcagtaaaa
gatctgacattggccaccaatttgttcgatcgttaccgtgacgcgggacgctttaatgca
gcgcaacaagccgaactgcaacatttcttactttaccgctcattgctaaaccgagaagga
aagcttgagcaatatgttgacgaacgtctcgctaaacaacctgacgatgtgctgattgcc
atgcggattcgctgggctctggcggataacaatcttgcaatcgtgaagcaatttctaccg
ttgttaactgctgaagaacaagctgactcacgctggttgtactggcgcgtcaagctgggc
ttggccaaagacgcagatgccaagcaactgttgcagactcgcaatttttacggttttacc
gcggcctttgagcaaggtgtggcgccacaactgcagccacaggcggttgccgacattgaa
cccgattctccgctattggctgatgcgggattgctgcgtgtaattgaattaatcgccatt
gataaaacgattgatgccaaacttgagtggcgcgaattaatgcaacgtcacagtgctgaa
gagcaaattcgctatggtggttatgcgttaaaacaaggttggtacgatctcagcgtggat
agcagtatcagcgccaaagcttgggattatttggcattgcgtttccccgaagtgcaaacc
accctgtacgacaaatactctaagcaatttaatgccgacaaatatcaattaatgtcgatc
gctcggcgtgaaagtgcattttatccgtatgctacatcaggtgcgggcgcgcgcggtttt
atgcagttgatgcccgacaccgccaaacgcaccgcgcaacgttataaattaacctataac
ggtactcgcagcctgtatgagccagagattaatatcccgctcggcagtgcctattttggc
ggtttgctgaagcaatttgatggcaaccgggtgttagccacagcggcctacaacgcaggg
ccatatcgcattaaacaatggctgaaaaagagtgcgggtaagttggatgtaatggcgttt
atcgaatccatcccctatcgtgaaacccgtgaatatgttcaaggggtgttctcttatcgc
atgatttacgagcagcaacagcaacttaataagccattctttaccgaaaaagaatataaa
aacacctattaa
DBGET
integrated database retrieval system
