Shewanella avicenniae: JYB87_09275
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Entry
JYB87_09275 CDS
T07845
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07727
putative transcriptional regulator
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
savi03000
]
JYB87_09275
Transcription factors [BR:
savi03000
]
Prokaryotic type
Helix-turn-helix
Other families
JYB87_09275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_26
HTH_3
HTH_19
Fe_dep_repr_C
Sigma54_DBD
HTH_31
DUF1275
Motif
Other DBs
NCBI-ProteinID:
QSX35353
LinkDB
All DBs
Position
2097833..2098072
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AA seq
79 aa
AA seq
DB search
MIRYKIRELVADKSKRDGRKITLSFLADQVGIQSSAMSKIANNTGYHTSVTTIEALCRYF
ECNIEDLLEYVADDEITKN
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
gtgattagatataagattagggaattagtagcagataaatctaagcgggatggtcgaaag
atcacgttgtcttttttggcagaccaagtaggaatccaaagctctgccatgtcaaaaatt
gctaacaacactggttatcatactagtgtcacgacaatagaagcgctgtgtagatacttt
gagtgcaacattgaagacttacttgagtatgtagcagacgacgaaattacaaagaattga
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