Shewanella avicenniae: JYB87_09625
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Entry
JYB87_09625 CDS
T07845
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
savi
Shewanella avicenniae
Pathway
savi00300
Lysine biosynthesis
savi01100
Metabolic pathways
savi01120
Microbial metabolism in diverse environments
savi01230
Biosynthesis of amino acids
Module
savi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JYB87_09625 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
savi01002
]
JYB87_09625 (dapE)
Enzymes [BR:
savi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
JYB87_09625 (dapE)
Peptidases and inhibitors [BR:
savi01002
]
Metallo peptidases
Family M20
JYB87_09625 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
QSX32052
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All DBs
Position
2179757..2180887
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AA seq
376 aa
AA seq
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MTNDVLDLAIDLISRPSVTPLDEGCQALMASRLAPLGFNCESMVFEDTTNMWARKGTESP
VFCFAGHTDVVPTGDLNRWHTPPFTPTVIDGYLHGRGAADMKGSLAAMVVAVERFVAQHP
NHKGSIAFLITSDEEGPFINGTPRVVDTLEARNEKMTWALVGEPSSTHKLGDIVKNGRRG
SLTGNLTVKGIQGHVAYPHLAENPIHKAAPALAELAATTWDNGNAFFPPTSFQIANINGG
TGASNVIPGELQVMFNFRYSTEVTAELLISKVEHILDTHGLDYEINWVFNGLPFLTGEGL
LLDATREAIFETTGVNTDAQTSGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVSVADL
ELLAQCYQRILEKLLC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgatgtattagaccttgctattgacctgattagtcgtccatcggttacaccg
cttgacgaaggttgccaagcgctgatggccagtcgcttagcaccgctcgggtttaattgt
gaatcaatggtgtttgaagacacaaccaatatgtgggcccgcaaaggcacagaaagccca
gtattttgctttgcagggcacaccgacgtagtaccaaccggcgatctcaaccgctggcat
acccctccgtttaccccgacggtgattgatggttatctgcacggtcgcggcgcagctgat
atgaaaggctcgttggcagcgatggtcgttgcggttgagcggtttgttgcccagcatccc
aatcataaaggctccattgcatttttgatcaccagtgatgaagaaggaccgtttatcaat
ggtacgccgcgcgtagtcgataccttagaggctcgcaacgaaaaaatgacttgggcgttg
gtgggtgaaccctctagcacccataaactgggtgatatcgtcaaaaatggccgtcgcggc
agtttgaccggcaacctcaccgtgaaagggattcaaggccatgtggcttacccgcatctg
gcagaaaacccaatccataaggccgcacctgcgcttgctgaacttgcagctacgacgtgg
gataatggcaatgcgtttttcccaccgaccagttttcaaatcgccaatatcaatggcggt
accggcgcatccaatgtgattcccggtgaactgcaagtgatgtttaacttccgttattca
accgaagttaccgcggaactgttgattagcaaagtggagcatattttagatacccacggg
ttagattatgagattaattgggtattcaacggcttaccgtttttaacgggcgaaggtctt
ttattagatgcaacccgtgaagcgatttttgaaacaaccggggtaaacaccgatgcacaa
acctcagggggtacgtctgatgggcgctttattgccccgaccggtgcgcaagtgattgaa
cttggtcccgtcaatgcaacaatccataaggtcaacgaatgtgtgtctgtggccgatctt
gagctattggcacagtgctatcagcgtattctggaaaaattgttgtgctaa
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