Shewanella avicenniae: JYB87_09640
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Entry
JYB87_09640 CDS
T07845
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
savi
Shewanella avicenniae
Pathway
savi00541
Biosynthesis of various nucleotide sugars
savi01100
Metabolic pathways
savi01250
Biosynthesis of nucleotide sugars
Module
savi_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JYB87_09640 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
savi01005
]
JYB87_09640 (kdsB)
Enzymes [BR:
savi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
JYB87_09640 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
savi01005
]
Lipid A
JYB87_09640 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
QSX32055
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Position
2182500..2183231
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AA seq
243 aa
AA seq
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MKVILIIPARYGSSRFPGKPLAMIKGKPMIQRVYERAQLAQGIDEIYVATDDDRIAAAVT
GFNGNVVMTTSDLASGTDRINQAIAHLGLADEDLVINLQGDQPLADPDSLEQLATLFKQA
PNQFEMATLAYQFGENDDPLDPNQVKVVFDNDMFALYFSRSPIPFGRDCSEYPIYKHLGV
YAYTCRFLKTFAALPMGRLEQLEKLEQLRALEHGHRIKLAFSKFNSTEVDTPEDVARCER
LMD
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcttgatcatccctgctcgctacggttcatctcgctttcccggaaagcct
ctggcaatgatcaaaggtaaaccgatgatccagcgcgtttacgaacgtgctcagttggcg
caaggcattgatgagatttacgttgccaccgatgatgatcgaattgcagcagccgtgacc
ggctttaacgggaacgtggtgatgaccacctctgatctcgcctctggtaccgatcgcatt
aaccaagcgattgcccacttgggattagctgatgaagatctggtcatcaacttacaaggt
gatcaacccttagcagatccagactccttggagcagttggctacgctgtttaaacaagcg
ccgaatcaatttgagatggctacactggcgtaccaattcggtgagaatgacgacccactc
gatcctaaccaagtgaaagtagtatttgataacgacatgtttgcgctttatttttctcgt
tcgccaattccttttggtcgcgattgcagcgaatatccgatttataagcacttaggtgtt
tacgcctatacttgccgctttcttaaaacgttcgcagcactgccaatgggccgcctagag
caacttgaaaagctagaacagttgcgcgcgttagagcatggacatcggattaagttagcc
tttagcaaattcaactcaaccgaggtcgacacgcctgaagacgttgcacgttgcgaacgt
ttaatggattaa
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