Shewanella avicenniae: JYB87_10040
Help
Entry
JYB87_10040 CDS
T07845
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
savi03000
]
JYB87_10040
Transcription factors [BR:
savi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JYB87_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
MarR_2
HTH_Tnp_ISL3
HTH_23
HTH_17
HTH_7
HTH_29
HTH_3
HTH_10
HTH_26
MerR
HTH_24
HTH_28
DUF977
HTH_11
TnsD
HTH_38
SpoIIID
HTH_31
DUF6238
HTH_Tnp_Tc3_2_like
Motif
Other DBs
NCBI-ProteinID:
QSX32127
LinkDB
All DBs
Position
complement(2271860..2272888)
Genome browser
AA seq
342 aa
AA seq
DB search
MATDNKKVTINDVARITGVSKRTVSRVINRSPLVGEETRKRIEQVIAELNFQPDKQARGL
ASRRSYLLGLIYDNPDALYIDQVQRGVLSVCTELGYELVVHPCKWREADFVDNCLKFIAR
SNVDGVLILPPVSESKQLAKALADAEHPYVRIASADLDDHENIVISNEREAMDEIVQHLL
DLGHERIGMITGPLSYYSSQERMVGIVTAAKNAGKPIAEQYIVEGKNTYESGLKCAEQLL
ALEPRPSAIFANNDETAAGVVRVAHTKGINVPEQLSVVGFDDNLFASRVIPSLTTMKRPV
EELAILATKKLLHRCQPEFFNHPLETVITPYLIKRESSAKPE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccacagataataaaaaagtcaccattaacgatgttgcccgcattactggggtgtca
aagcgcaccgtgtctcgggtgatcaatcgctcgccgctcgtgggtgaggaaacccgtaaa
cgcattgaacaagtgattgccgagcttaatttccaacccgataaacaagcccgcggtcta
gcgtcacgacgatcctacctgctggggttaatttacgataaccccgatgcgctctatatc
gaccaagtgcaacgcggggtgttgtctgtgtgcactgagctggggtacgaattggtggtt
cacccctgcaaatggcgcgaagccgactttgtggataattgcctgaagtttattgcccga
tccaatgtggatggagtactgattctgccgccagtttctgagagtaaacagcttgccaaa
gcgctggcggatgcggaacacccctatgtgcgtattgcgtcagcggatttagatgaccat
gaaaacattgtgatttccaatgaacgcgaggcgatggacgaaattgtgcagcatctgttg
gatctcggccatgaacgtattggcatgatcaccgggccattaagctattactcctctcag
gagcggatggttggtattgtcactgccgctaaaaatgccggtaagccaatcgcggaacag
tatattgtcgaaggtaaaaatacctacgaaagtggtttgaaatgtgccgagcaactgttg
gcgcttgagccgcgtcccagcgctatttttgccaataacgatgagactgcggccggggta
gtgcgggtggcgcataccaaagggattaacgtccctgaacagctgtcggtagttggtttc
gacgataacttatttgcttcgcgggtgatcccgtcactcaccactatgaagcgtccggta
gaagaactggcgattttggcgaccaaaaaattgctgcatcgctgccaaccggaattcttt
aatcatccactcgaaacggtaattacgccgtacctgattaaacgcgaatcgagcgctaag
cctgaataa
DBGET
integrated database retrieval system
