Shewanella avicenniae: JYB87_10075
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Entry
JYB87_10075 CDS
T07845
Name
(GenBank) DUF4981 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
savi
Shewanella avicenniae
Pathway
savi00052
Galactose metabolism
savi00511
Other glycan degradation
savi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
JYB87_10075
09103 Lipid metabolism
00600 Sphingolipid metabolism
JYB87_10075
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
JYB87_10075
Enzymes [BR:
savi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
JYB87_10075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Glyco_hydro_72
Motif
Other DBs
NCBI-ProteinID:
QSX32133
LinkDB
All DBs
Position
2281282..2284419
Genome browser
AA seq
1045 aa
AA seq
DB search
MISHLFKRTKTCAVVLGLMSCVPYQQLQAAQVNDWENPAVFAVNSLPDRAFFISYPTKSL
AMAGDEQASAQYHSLNGQWHFNFVETPAQRPLDFFEKDFDVSKWPLIKVPSNWQLQGYDY
PIYVNHGYGFPKNKPLAPEYDPVGSYRRDFTVADDWQDKRIILHFGSVKSAFYVWVNGKK
VGYSQDGKLPAEFDITDFVNKGNNSLSVQVFRWSDGSYLEDQDMWRMSGIQRDVFLQVVP
KVQLWDFHADTSLQNSFKDGLLDLSVKLQNSDSKAQDVALHAAVYDGDKLLWQNKTELSI
AAGNTEIIEKTHQFANVGAWSAETPKLYDLVLTLSRKGEQDQVVRQALGFRNVKIEKGQL
LVNGQPIIIKGVNRHEVEAKNGQAIGRESMLRDIQLMKQFNVNTVRNSHYPNDPYWYQLC
DQYGLYVVDEANVESHGYGFTPEGNIGNDPQFKDAILERIKGMIERDKNHPSIISWSLGN
EIGPGPNMSAAYRYVKSIEDNRIVQFETRETWFKEKMTDVIGWMYADRNEITTKYLDKYP
EQPFIWVEYAHTMGNAGGNLKELWDYVYEHPQVQGGSVWDWVDQGLEQTDANGNIYYAYG
GDFEPKGTRNANNYLANGLIGSDRNPHPDLYELKKLYQNIVVKPQANGEYLITNRNFFKD
LSDVTGQWALLENGTVVMQGELPTLHTPPQGDSTVKIAQLNGYPFKDGKEYLLDFKFVSK
AKQGVIPAGHVMAADQFILQSPMAAPVVSKAAKLSLNDGDKLISVTSDAVKLAFNKQTGR
LQSYQVDGVELIKAGEGLFPNFWRALTDKDFGNRLGEKSAVFKDAAATANVTDVEIEQTQ
GQANIRFTLDFPALKSSANISYQVGAKGEVLVDYQATLSKELPEMPRFGLKMQLPEGFDN
ASWYGRGPWENYQDRKYAADLGIYHAKVSELYTPYIRPQENGNRSDTRWLTITNKDGVGL
KVIGDPQFDFTAHHNTIADFDYPKEAQRHINDIQPRPLTELILDLRQRGAGGDNSWGATP
YDQYRLLPEKQQTYELKLLLQPISK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgattagccatctgtttaagcgcaccaaaacgtgcgctgttgtactcggcttaatgtca
tgtgtaccgtatcagcaactgcaagctgctcaagttaatgattgggaaaacccagcagta
tttgcggtaaattctctgccggatcgcgccttttttatctcctatccgaccaaatcgtta
gcgatggctggagatgaacaggcctcagctcaataccattcgctcaatggccaatggcac
ttcaactttgttgaaacacctgcgcagcgcccgctcgatttctttgaaaaagattttgat
gtatcaaaatggccgctgatcaaagtgccatcaaactggcagctgcaggggtacgactac
cctatctatgtgaatcacggttacggctttccaaaaaacaagccgctggcgcctgagtac
gatccggttggctcttatcgtcgtgactttaccgtggctgacgactggcaagataaacgc
atcattctgcactttggctcagtaaagtctgccttctatgtgtgggtcaatggcaaaaaa
gtcggctacagccaagatggcaaactgcccgccgaatttgacatcaccgatttcgtcaat
aaaggcaataacagcctgtctgtgcaagtattccgctggagcgatggcagctatcttgaa
gaccaagatatgtggcgcatgagcggtattcagcgcgatgtattcctgcaagtggtgcct
aaagtgcaattgtgggatttccatgccgatacatcgctgcaaaacagctttaaagacggt
ctgctcgatctgagcgttaaactgcaaaacagtgacagcaaagcccaagatgttgcactg
catgctgcagtgtatgatggcgacaagttgctttggcaaaacaaaaccgaactcagtatt
gctgcgggcaataccgaaatcattgaaaagacccatcaatttgccaatgtcggcgcatgg
tcagcagaaacacccaaactgtacgacttggtgctgaccttgagccgcaaaggcgagcag
gaccaagtggtgcgtcaagcactcggcttccgtaacgttaaaattgaaaaaggtcagctg
ttggtgaacggccagccgatcatcatcaaaggggtaaaccgccacgaggttgaagcgaag
aacggccaagcgattgggcgtgagagcatgctgcgcgacatccaattgatgaagcagttt
aacgtaaacacggtacgtaactcgcactaccccaatgacccttactggtatcaactgtgc
gatcagtacggcttgtatgtggtcgatgaggccaacgtggaatcacatggctatggcttt
accccagaaggcaatatcggtaatgatccgcaattcaaggatgccattcttgaacgcatt
aagggcatgattgagcgcgataaaaaccacccatcgattatctcgtggtcattgggcaat
gaaatcggcccaggcccgaatatgtctgccgcctatcgttacgtgaagtcgattgaagac
aaccgtatcgtgcagtttgaaacccgcgaaacttggttcaaagagaaaatgaccgatgtg
attggctggatgtacgccgaccgcaacgaaatcaccaccaagtaccttgataagtaccca
gagcagccatttatttgggtggaatacgctcataccatgggcaacgccggcggtaaccta
aaagagttgtgggactatgtctatgagcatccacaagtgcaaggcggcagtgtatgggat
tgggttgaccaaggcttagagcaaacagacgccaacggcaacatctactacgcctatggc
ggcgactttgaaccgaaaggcacccgtaacgccaataactatctggccaacggcttgatt
ggttctgatcgcaatccgcaccccgatttgtatgagctgaaaaaactctaccaaaacatt
gtggttaagccgcaagccaatggtgaatacctcattaccaaccgtaacttctttaaagat
ttaagcgatgttaccggtcaatgggcgctgttagaaaatggcacagtagtaatgcaaggc
gagctgccaacgctgcacaccccaccacaaggcgacagcacagttaaaatcgctcaattg
aacggctacccattcaaagatggtaaagaatacctgctcgattttaaatttgtgagcaag
gcgaaacagggcgtgattccggctgggcatgtaatggccgctgatcaatttatactgcaa
tcgccaatggcagctcccgtggtgagtaaggccgcgaagctgagtttgaatgacggcgac
aagctcatcagcgtcaccagcgatgcagtcaagcttgccttcaacaagcaaacaggccgt
ttgcaaagctatcaagttgacggtgttgagttgattaaagcaggtgaaggcttgttccct
aacttctggcgtgcgctgaccgataaggacttcggtaaccgcttaggtgagaagtctgcc
gtatttaaagatgctgcagcgacggccaacgtcaccgatgttgagattgagcaaacccaa
gggcaagccaatatccgctttacgttggacttccctgcactgaagagctcggccaacatc
agctatcaagtgggtgctaaaggtgaagtactggtggattaccaagcaacgctgagcaag
gaattgcctgagatgccacgctttggcttaaagatgcaactgccagaaggcttcgataac
gccagttggtatggccgtggtccttgggaaaactaccaagaccgtaaatacgcggcggat
ttaggtatctaccacgccaaagtgagcgagctatatacgccatatattcgtccgcaagaa
aacggtaaccgtagcgacacccgttggctgaccatcaccaataaagatggcgtgggtctg
aaagtgattggcgatccgcagtttgatttcactgcgcatcacaacaccattgctgatttt
gactatccaaaagaagcacagcgccacatcaacgatattcaaccgcggccattgaccgag
ttgatcctcgatctgcgtcaacgtggtgccggtggtgataacagttggggcgcaacccct
tacgatcaatatcgattattgccggaaaaacagcagacgtatgagctcaagctgttgctg
caacctatcagcaaatag
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