Shewanella avicenniae: JYB87_10550
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Entry
JYB87_10550 CDS
T07845
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_10550
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_10550
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QSX32221
UniProt:
A0ABX7QL97
LinkDB
All DBs
Position
complement(2391785..2393923)
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AA seq
712 aa
AA seq
DB search
MKYGYFSTALLLGCAQFTASAVHANPTSVNTATTPTPVTRSHDEVERITIQYRQAYRGDV
PASALPQAITTLDHQLLQDIGAGSLQDAMDFSASAARQNNSGGMWDSFSLRGFPGNENMP
AGYLINGFSGGRGYSGPRDPASIDYIEVLKGPGSALYGRSEPGGAVNIITKKPQNLTQGY
LKTEWGSFALQRLEGDITGGITDDIAARFIGSFSDSDSYRDFVGKRSVTVTPSLRWQLTD
DTSLLYEFEWIKRQQLFDRGIVVLNDDLNTVPSSRYLGEPGDGATDIYAAGHQITFEHFI
NDDWQLTGGFNHRHSTLRGYSSDTELSASRQSLYDDGHTLTRQRRYRDYASEDSSVRVEL
NGQLETSGLTHHLLLGADGYRYELQTGLYRYRGGKGSYDIDIFAPDYGSQALPDVSLLYD
NREHQRAVGVYLQDQIDISEHWQALLGLRFDVTNQEIFEIASQSDSTRHDKRLSPRLGLV
YQLDDELSFYGSYSEGFLPLSGTDAQGQPFGSEESRSFEVGAKWQTDSLQATLALFDAHK
SNILVSDPVNVGFSAPLGSARSRGLELDASYQAPWFDLQLSYSLLNTETDSDSVNADWGV
PIPKGSPLVNVPRHTLALLLSRDFYLDDIYLRAGFSYRLVDDRLGDAADLSFRLPAYQVY
GAFLRWQLNEQLTLALNANNLFDKTYIDSSYNALWAYPGAPRNFKLSVSYGF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacggttatttttcaaccgcgctgctacttggctgcgcgcaattcactgccagt
gcggttcacgccaacccaacatcagtcaatacggccactacgccaactcccgtcactagg
agtcatgacgaagttgagcggatcaccattcagtatcgtcaggcttatcgcggcgacgtg
cctgcatcggccttaccacaagcgatcaccacgttagatcatcaactgttgcaggatatt
ggcgctggctcgttgcaggatgcaatggattttagtgcctcagctgcacgacaaaataac
agtggcggcatgtgggatagcttttcgttaaggggctttcccggcaacgagaacatgcct
gcgggttacttaatcaatggttttagtggcgggcgtggctatagtggtccacgcgatcca
gcctcaattgattacattgaagtgctaaaaggccccggctccgcactttatggccgttca
gagcctggcggtgcggtcaatatcattactaaaaagccacaaaacctgacccaaggctac
ttgaaaaccgagtggggcagtttcgctctgcaaaggttagaaggggacatcacgggcggc
attaccgacgatatcgcggcgcgatttatcggcagctttagtgacagtgatagctatcga
gattttgtcggtaaacgttcagtcaccgtgacgccatcattgcgctggcaactgactgac
gacacctcgctgctgtatgaatttgaatggattaaacggcagcagttgtttgatcgcggc
attgtggtgctgaatgatgatctgaatactgtgcctagctcgcgctatttaggtgagccc
ggtgatggcgccacggatatttatgccgccggtcatcagattacctttgagcattttatc
aatgatgattggcaactgacgggcggctttaatcatcgtcactcaaccctgcgcggttac
tcatccgataccgaattatcggcatcgcgacagtcactctatgatgacggtcatacgctg
acgcgtcagcgccgttatcgtgactatgcttcggaagatagctccgtgcgtgtcgagctt
aacggccaacttgagactagcggcttaacccatcatttgctgttgggcgctgatggttat
cgttatgaactacaaactgggctgtaccgttatcgcggtggcaagggtagttatgacatc
gacatattcgcgcctgattacggcagccaagcgttacctgatgtgagcctgctgtatgac
aaccgcgagcatcaacgcgcagtgggcgtttatttgcaagatcaaatcgatatcagcgaa
cactggcaggcgttgttagggttgcgctttgatgtgaccaatcaagagatctttgagatt
gctagccaatcagattcaacccgtcacgataagcgccttagcccgcgcttaggcttggtc
tatcagttggatgatgagttaagtttttacggcagttattcggaaggctttttgccgctg
agtggcactgacgctcaagggcagccgtttggttcagaagaaagtcgctcatttgaggtg
ggggccaaatggcagaccgactcattacaagctaccttggcgttgtttgatgcacataag
agcaatattttggtgtcagatccggtcaacgttggcttttcagcgccattgggcagtgcc
cgcagccgtggactagagttagacgccagctaccaagcgccttggttcgatctgcagttg
tcttacagtttgctaaataccgaaaccgatagcgacagcgtgaacgccgattggggtgtt
ccgatcccgaaaggtagcccgttagttaacgtgccccgtcacaccttggcgctgttgttg
agtcgtgatttttatctcgatgacatctatcttcgggctggctttagctatcgcttggtt
gacgataggttaggagatgcggccgatttgagcttccgtttaccggcatatcaagtgtac
ggcgcgttcctgcgctggcaactcaacgagcaactaacgttggcgttgaatgccaacaat
ttgttcgacaaaacctatatcgacagcagctacaacgcgttatgggcatacccgggcgcg
ccccgcaattttaaactgagtgtaagttatggtttctaa
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