Shewanella avicenniae: JYB87_10735
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Entry
JYB87_10735 CDS
T07845
Name
(GenBank) class I SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
savi03009
]
JYB87_10735
Enzymes [BR:
savi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
JYB87_10735
Ribosome biogenesis [BR:
savi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB87_10735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
PrmA
Motif
Other DBs
NCBI-ProteinID:
QSX32253
LinkDB
All DBs
Position
complement(2435908..2436876)
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AA seq
322 aa
AA seq
DB search
MQAFVDAIAAITPSTDAERLIHGRGGMLPGGEHLCVDWFPPALLLTSFRELTTDELHKLQ
QALVQRFAELNLPLNLVYQHRAGGQTQTVLLQGELPEPHVVTENGRQFYVHLLRGQNHGL
FLDMRNGRQWVAENAKFKKVLNLFSYTCAFSVAALSGGADEVVNIDMAKGALSTGKQNHV
LNEMPSGARFLGHDIFKSWGKLKKLGPYDLLIADPPSNQKGSFVATKDYVRLLRRLPELL
NDGADVLLCLNAPELGRDFLMQQVADTLPQLRFIEQIENPPVFADVDADRALKVLLYRYH
ADAVVAADADTDVQAEAGSSAA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttgttgatgcaattgcggcgattacgccgagtaccgatgctgaacgttta
attcatggccgtggcggtatgttgcctgggggagaacacctgtgtgttgattggtttccg
ccagcgctgctgttgacctcgtttcgagaattaaccaccgacgaattacataagttgcag
caggcattggtgcagcgttttgcagagcttaatctgccgctgaatttggtctatcagcat
cgcgcgggtggtcaaacgcaaactgtgttgctgcaaggtgaactgccagaaccgcatgtt
gtgaccgaaaatggccgacagttttatgtgcacttgctgcgagggcaaaaccacggctta
tttcttgatatgcgcaatggccgtcaatgggtggctgagaacgccaaattcaaaaaagta
ctgaatctgttctcctatacctgtgcattttcagtggctgcgcttagcggtggcgctgac
gaagtggtcaatatcgatatggcgaaaggggcgctgtcaacgggcaagcaaaaccatgtg
ctgaatgagatgccctcaggggcgcgtttcctcggccacgatatttttaaatcttggggc
aaactgaaaaaacttggaccctatgatctgttgattgccgatccgcccagcaatcaaaaa
ggcagttttgtcgccaccaaggattatgtgcgtctgttacgccgtttgcctgagctatta
aatgacggcgctgacgtattgctttgcttaaatgcgccagagttaggccgagattttttg
atgcagcaagtggccgacacactgccgcagctgcgttttattgaacagattgaaaatccg
ccagtgtttgctgatgttgatgctgatcgggcattaaaagtgctgctgtaccgttatcac
gccgatgctgtggttgccgctgacgccgacacagacgtgcaagctgaagcagggagctct
gcagcttag
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