Shewanella avicenniae: JYB87_10955
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Entry
JYB87_10955 CDS
T07845
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
savi03009
]
JYB87_10955 (rluB)
Enzymes [BR:
savi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
JYB87_10955 (rluB)
Ribosome biogenesis [BR:
savi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB87_10955 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QSX32293
LinkDB
All DBs
Position
complement(2485625..2486509)
Genome browser
AA seq
294 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREMEAWIAAGRVSVEGEIATLGDRIEADAKVRIDGRPVSLKSA
EDVICRVLAYHKPEGEICSRKDPEGRPTVFDRLPRTKDSRWVAVGRLDINTSGLLLFTSD
GELANRLMHPSREVEREYAVRTFGEVTDAKVQQLRTGVTLEDGPAQFDAIKSAGGEGINQ
WWHVVLCEGRNREVRRLWEAVEVQVSRLIRVRYGMIELPKTLPRGGWMELPLDQVNYLRH
IAGLDAEERSLLGMDKHSVARAKVRSAKVRRAVRKHKTPGTASNGRKAPTRTRS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattgcagaaagtcttggcccgcgcaggccatggctcccgtcgtgagatg
gaggcatggattgctgcaggccgggtgagtgtcgaaggtgagattgcgaccttaggtgat
cgcatcgaagctgacgccaaagtgcgtatcgatggtcgtccggtatcgctcaagtcagcc
gaggacgttatttgtcgcgtgctggcttatcacaaaccagaaggcgagatctgctctcgt
aaagaccctgaagggcgtccaacggtatttgaccgtttaccacgcaccaaagatagccgc
tgggtagcggttggtcgtctggatatcaacacctccggtttgttgctgtttacctctgat
ggtgaattggcgaaccgattaatgcacccatccagagaagtcgagcgtgaatacgcagtt
cgtacctttggtgaagtaacggatgcaaaagttcagcagttgcgtacgggtgttacattg
gaagatggtcctgcacagtttgacgcaattaaatctgctggcggtgagggcatcaaccag
tggtggcacgtggtgctgtgtgaaggtcgtaaccgtgaagtacgccgtctgtgggaagcg
gttgaggtgcaagttagccgattgatccgcgtgcgttacggcatgattgaattgccaaaa
accttgccgcgtggtggctggatggagttaccgttagatcaggtgaactacttacgtcac
attgcagggttggatgctgaagaacgttccttgctaggaatggacaaacacagtgtggca
cgtgcgaaagtgcgcagtgccaaagttcgtcgcgctgtgcgcaagcataaaacgcctggt
actgcgagtaatggccgtaaagcgccaacccgtactcgtagctaa
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