Shewanella avicenniae: JYB87_11470
Help
Entry
JYB87_11470 CDS
T07845
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
savi
Shewanella avicenniae
Pathway
savi00020
Citrate cycle (TCA cycle)
savi00190
Oxidative phosphorylation
savi00650
Butanoate metabolism
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
savi01120
Microbial metabolism in diverse environments
savi01200
Carbon metabolism
Module
savi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
savi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
savi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB87_11470
00650 Butanoate metabolism
JYB87_11470
09102 Energy metabolism
00190 Oxidative phosphorylation
JYB87_11470
Enzymes [BR:
savi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JYB87_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_9
Fer4_7
Fer4_18
Fer4_3
Fer4
Fer4_4
Fer4_2
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
QSX32385
LinkDB
All DBs
Position
complement(2603886..2604593)
Genome browser
AA seq
235 aa
AA seq
DB search
MKLDIAVYRYNPDVDKKPYMKDYQLEIPDGSDMMMLDVLMRLKEQDPTLAFRRSCREGVC
GSDGMNMNGKNGLACITPVSTFKGKKLEIRPLPGMPVVRDLIVDLSQFYKQYEKIKPYLI
NDDKQPAREHLQSPEERAHLDGLYECIMCACCSTACPSFWWNPDKFVGPSGLLHAYRFLI
DSRDTATEERLSELDDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLNRAV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagacattgcagtttatcgctacaatcctgatgtagataaaaagccctacatg
aaggattaccaactggaaattccagatggctcggacatgatgatgttggatgtgttgatg
cgattgaaagagcaagatccaacgttagcgttccgtcgttcatgtcgtgaaggggtttgc
ggctctgacggtatgaacatgaacggtaagaatggtcttgcctgtattacccctgtttca
acctttaaaggtaagaaactggagatcagaccactaccagggatgccggttgttcgtgat
ttaattgttgatttaagtcagttttataagcaatacgaaaagattaagccatacttaatc
aatgacgataagcaaccagcacgtgagcatttgcaatctcctgaagagcgcgcacacttg
gatggtctgtatgaatgtatcatgtgtgcttgttgttctacggcttgtccttcgttctgg
tggaaccctgataaattcgttggcccaagcggcttgttgcacgcttatcgcttcttgatt
gatagtcgcgatactgcaactgaagagcgtttatcagaactagacgatgcatacagtgta
ttccgttgccacggcattatgaattgtgttgatgtctgtcctaaagggcttaaccctact
aaagcgattggacacatcaagtctatgttgctgaatcgggcggtataa
DBGET
integrated database retrieval system