Shewanella avicenniae: JYB87_12380
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Entry
JYB87_12380 CDS
T07845
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
savi
Shewanella avicenniae
Pathway
savi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB87_12380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_12380
Transporters [BR:
savi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JYB87_12380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_16
AAA_29
AAA_21
AAA_24
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
QSX32557
LinkDB
All DBs
Position
2795441..2797282
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AA seq
613 aa
AA seq
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MINRLLGLFESWTKPLPNIEPSQPPRGLWAFCRHYTQGFERPLLLMSLLTATIAVLEVSL
FGFMGQLVDWLVTKNPETLLAEEGTTLIGMGLLVLVFIPLLTLLHALIVYQSLLGNYPMA
IRWLAHKYLLRQSISFYQNEFAGRVATKVMQTSLAVRETVMKLLDVLMYILVYFTSMVVM
MAKADWRMVIPMALWLTCYILLQWFFIPRLKAVASEQADARSTMTGRIVDSYSNISTVKL
FAHTQQEANYARSSMREFLATVYRQMRLVTGINVSVQVLNYLLAFSVAALSIWLWMDSAI
TVGAIAIAVSLALRLNGMSQWIMWEVSALFENLGTVSDGMNTLSQTANVTDDPNAVPLNI
SAGAILFNDVCFDYGEKNGVLKHLNLAIRPGEKIGLVGRSGAGKSTLVNLLLRFYDIESG
AILIDGQNIKDVSQDSLRSNIGMVTQDTSLLHRSIRENILYGRPDASDAEMLSAIEKAQA
NEFIEQLTDPHGNRGLDAQVGERGVKLSGGQRQRIAIARVLLKDAPILVLDEATSALDSE
VEAAIQQSLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDQGQIVEQGSHKELIAQQGIYAQ
LWQRQTGGFLGVD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgataaatcgcttactcggtctatttgaatcttggaccaaaccactacctaatattgag
cccagccaacctcctcgcgggctgtgggcattttgccgccattacactcaaggatttgag
cggccattactgctgatgtcactgctcaccgctacgatcgcggtgctcgaagtctcgctg
tttggttttatggggcagttagtggactggctagtaaccaaaaaccctgagactttgttg
gcggaagaaggaacaacattgatcggcatggggctgctggtgttagtttttattccgcta
ttaaccctactccatgcgctgattgtttaccaaagcttgttaggcaactaccccatggcg
attcgctggctggcgcacaaatacctgctcagacaaagcatttccttttatcagaacgag
tttgctgggcgagtggcgacaaaagtcatgcagacatcgttagccgtacgcgaaaccgtg
atgaagctgttagatgtgctgatgtacatcttggtgtatttcacctcgatggtggtgatg
atggctaaagccgattggcggatggtgatccctatggcgttgtggctcacttgttacatc
ttgctgcaatggtttttcattccgcgcttaaaagctgtggccagcgaacaagccgatgca
cgttcaaccatgacgggtcgtatcgttgatagttattccaatatttctaccgttaaactg
ttcgcccacacacagcaagaagccaattatgcgcgcagcagcatgcgtgagtttttggca
accgtataccgccaaatgcgcttggtcaccggcattaacgttagcgtacaggtattaaac
tatcttctggcgttctccgtggcggcgctgtcaatttggttgtggatggacagcgcgatt
accgtgggggcgattgccatcgccgttagcctcgcattgcgcctaaatggcatgtcgcaa
tggatcatgtgggaagtcagcgccttatttgaaaacttaggcacggtctccgatggcatg
aataccttatcgcaaacagccaatgtcaccgacgatcccaatgcggtgccactgaacatc
agcgcaggagccattctattcaatgatgtgtgctttgattacggtgaaaaaaacggtgtg
ctgaagcacttaaacctagcgataaggccaggtgaaaaaattggcctggtcggtcgctct
ggcgcgggcaaatcaaccttggtgaatctgttgctgcgtttttatgatatcgaatcaggc
gccatcttaattgatggccaaaatatcaaagatgtcagccaagattcactgcgctcaaat
atcggcatggtgacccaagatacatcactgctgcaccgctccattcgtgaaaatattctt
tacggccgcccggatgcctctgacgcggagatgctgagtgcgatagaaaaggcgcaagca
aatgaattcattgaacaactgaccgacccgcatggaaatcgcggtcttgatgcacaagtt
ggtgagcgcggcgtaaaactctcaggtggccaacgtcaacggatcgcgattgcgcgagta
ttactcaaagacgcaccgattctggtacttgatgaagcgacctctgcactcgactctgaa
gttgaagccgctatccaacaaagcctataccagttaatggaaggcaaaacagttatcgcg
attgcccaccgattatctacgattgcagcgatggatagattgatcgtgctagatcaaggt
caaattgttgagcaaggctcacataaagagttgatagcgcaacaaggtatctatgctcag
ctttggcagcgacaaactgggggattcttgggcgttgactaa
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