KEGG   Shewanella avicenniae: JYB87_12435
Entry
JYB87_12435       CDS       T07845                                 
Symbol
gltX
Name
(GenBank) glutamate--tRNA ligase
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
savi  Shewanella avicenniae
Pathway
savi00860  Porphyrin metabolism
savi00970  Aminoacyl-tRNA biosynthesis
savi01100  Metabolic pathways
savi01110  Biosynthesis of secondary metabolites
savi01120  Microbial metabolism in diverse environments
savi01240  Biosynthesis of cofactors
Module
savi_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:savi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    JYB87_12435 (gltX)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    JYB87_12435 (gltX)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:savi01007]
    JYB87_12435 (gltX)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:savi03016]
    JYB87_12435 (gltX)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:savi02048]
    JYB87_12435 (gltX)
Enzymes [BR:savi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     JYB87_12435 (gltX)
Amino acid related enzymes [BR:savi01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   JYB87_12435 (gltX)
Transfer RNA biogenesis [BR:savi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    JYB87_12435 (gltX)
 Prokaryotic type
   Other AARSs
    JYB87_12435 (gltX)
Prokaryotic defense system [BR:savi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    JYB87_12435 (gltX)
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-ProteinID: QSX32561
LinkDB
Position
complement(2803241..2804650)
AA seq 469 aa
MTIKTRFAPSPTGYLHVGGARTALYSWLHARANNGEFVLRIEDTDLERSTQEAVDAILEG
MEWLNLNWDEGPYYQTKRFDRYKELIGKMLEEGTAYKCYCSKERLEKLREEQAAKGERQG
YDGCCRDHAPRDTDEPYVVRFKNPLDGSVVFDDHVRGRIEISNQELDDLIIARTDGTPTY
NFCVVVDDWDMGITCVIRGEDHINNTPKQINILQALGAPIPEYAHVAMILGDDGAKLSKR
HGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSIDEMVQFFKLDDINKAASAFNTE
KLLWLNQHYIKSADPEYVASHLEWHMKDQNIDTSNGPALKDVVTALAERAKTLKELAASS
RYFYEDFEEFEEAAAKKHLRGVALEPLKLVQQKVAALTEWTPEAIHDAIEATATELDVGM
GKVGMPLRVAVTGAGQSPSLDITLFLIGKTRCEQRISKAVEFVASRINS
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaccatcaagacgcgttttgctcctagcccaaccggctatctccatgtgggcggtgct
cgcacagccctttattcttggctacatgctcgtgccaataacggcgaattcgtattgcgt
attgaagacacggatctggagcgttcgactcaggaagctgtcgatgccattttagaaggg
atggaatggctaaacctgaattgggatgaaggtccgtactaccagactaagcgtttcgac
cgctataaagagttgattggcaaaatgctggaagagggcactgcctataaatgttactgc
tcaaaagaacgtttagaaaaattacgtgaagagcaagcggcaaaaggcgaacgtcaggga
tatgatggttgttgccgtgatcatgcaccgcgtgacaccgacgagccttatgtggttcgc
tttaaaaatccgctcgacggtagcgtagtgtttgatgatcacgtacgtggacgtatcgaa
atctctaaccaagagttggatgatttgattattgcccgtaccgatggcacacctacctat
aacttctgtgtagtggttgatgactgggatatgggcatcacctgcgtaattcgtggtgaa
gaccatatcaataacacccccaaacagatcaatattctgcaagcattgggtgctcctatc
cctgaatatgcgcacgtggcgatgatccttggtgacgacggtgctaagttgtcaaaacgt
cacggcgcggtcagtgtgatgcaataccgtgatgatggctacttacccgaagccttgttg
aactatttggtgcgtttgggctggtctcatggcgatcaagaaatcttctcgattgatgaa
atggtgcagttcttcaagctggatgacatcaacaaagcagcgtctgcctttaacacagaa
aaactgctgtggttgaaccaacattatattaagtcggctgatcctgaatatgtggcatca
caccttgagtggcacatgaaagatcagaacatcgataccagcaatggcccagcattgaaa
gatgtagtgacggcgcttgctgagcgtgccaagaccttaaaagaactggcggcgtcgagt
cgttacttctatgaggactttgaagagtttgaagaagctgcggctaagaagcatctgcgc
ggtgttgcgttagagccattgaagttagtgcaacaaaaagtagctgcactcactgaatgg
acgcctgaagcaattcatgacgccattgaagcaacagcgacggaactcgacgttggcatg
ggcaaagtaggtatgccactgcgtgtagccgttaccggtgctggccaatcaccatctctg
gatatcacgctgtttctcattgggaaaacccgttgcgagcaaagaatatccaaagcggtt
gaatttgtagcaagcagaataaattcctaa

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