Shewanella avicenniae: JYB87_12440
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Entry
JYB87_12440 CDS
T07845
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
savi
Shewanella avicenniae
Pathway
savi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYB87_12440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_12440
Transporters [BR:
savi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYB87_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
QSX32562
LinkDB
All DBs
Position
2805042..2806070
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AA seq
342 aa
AA seq
DB search
MTIRNTKHISFISQPLKTIAMAAFAVGAMATSFIAAAEPVEIKFSHVVAENTPKGQAALK
FKALVEERLPGEYTVSVFPNSQLFGDNNELAALLLNDVQFVAPSLSKFERYTKRLQLFDL
PFLFKDMDAVEKFQTSDAGQSLLSSMKRKGIEGMGYLHNGMKQFSANDPMTLPKDASGKK
FRVMASDVLAAQFDTLQATAVKKPFSEVFTLLQTRAIDGQENTWSNIYSKKFYEVQSYIT
ESNHGVLDYMVVTSSAFWKGLPADKRKVIKQCLDEAIAFGNKLAADKNAEDRQLIVDSGV
TKVVELSDSERQAWIDAMKPVWKQFEDQIGKDMIDAAVAANK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgactataagaaataccaagcacatcagttttatctcacaaccgctgaaaactatcgct
atggcagcatttgctgttggggcaatggcgacaagttttattgctgcagctgaaccggta
gagattaagttctcgcacgtggttgcagaaaacacacctaaaggccaagctgctttgaaa
tttaaagccttggttgaagaacgtttaccaggcgaatataccgttagcgtattccctaac
tcacaattgtttggtgacaacaacgaattggctgcactgctgctgaacgacgttcaattt
gtggcgccatccctgtctaagttcgagcgttacaccaagcgtttacaactgtttgatctg
ccgttcctgtttaaagacatggatgcagttgaaaaattccaaacgagcgatgcaggtcaa
tcactgctgagttcaatgaagcgcaaaggcattgaaggtatgggttacctgcacaatggt
atgaagcagttctctgctaacgatccaatgaccttacctaaagatgcatcaggcaaaaaa
ttccgcgtaatggcctctgacgtgcttgcggctcaattcgatacccttcaagcaactgca
gttaaaaaaccattctctgaagtgtttaccctgctgcaaacccgcgcgattgatggtcaa
gaaaacacttggtcaaatatctactctaaaaaattctatgaagtacagtcttacatcact
gaaagtaatcacggcgttttggattacatggtcgtgacctcttctgcattctggaaaggc
ttacctgctgacaaacgtaaagtgatcaagcaatgtttggatgaagcaattgccttcggt
aacaagctggctgctgacaaaaatgctgaagaccgtcaactgatcgttgattcaggtgta
actaaagtggttgagctgtctgacagcgaacgccaagcttggattgatgcaatgaagcca
gtatggaaacagttcgaagatcaaatcggtaaagacatgatcgatgctgctgttgcagca
aacaaataa
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integrated database retrieval system
