KEGG   Shewanella avicenniae: JYB87_13065
Entry
JYB87_13065       CDS       T07845                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
savi  Shewanella avicenniae
Pathway
savi00521  Streptomycin biosynthesis
savi00523  Polyketide sugar unit biosynthesis
savi00525  Acarbose and validamycin biosynthesis
savi00541  O-Antigen nucleotide sugar biosynthesis
savi01100  Metabolic pathways
savi01110  Biosynthesis of secondary metabolites
savi01250  Biosynthesis of nucleotide sugars
Module
savi_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:savi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    JYB87_13065 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JYB87_13065 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    JYB87_13065 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JYB87_13065 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    JYB87_13065 (rfbB)
Enzymes [BR:savi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     JYB87_13065 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase NAD_binding_4 Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD adh_short DUF6532
Other DBs
NCBI-ProteinID: QSX32675
LinkDB
Position
complement(2948291..2949400)
AA seq 369 aa
MKRLLVTGAAGFIGANFVHYWLSQHADDRVVVLDALTYAGNLETLMPLMDKPNFRFVKGN
IGNTELVELLLREEQIDTLVHFAAESHVDRSITGPDAFVETNIIGTHSLLKAARSVWLAD
PANPLPHRFHHVSTDEVYGTLGANDPAFTEQTQYAPNSPYSASKAASDHLVRAYHHTYGL
NVTTSNCSNNYGYYHFPEKLIPLCLTNILEGKPLPIYGDGKQIRDWLFVEDHCRGIELVL
QKGVTGETYNIGGVNEWQNIDIVNLLCELMDGEFAADASLAERYPQSPCAQGKPANSLIT
YVKDRAGHDRRYAIDCSKIERELGFKPAETFETGVRKTVRWYLDNQSWVDNVKSGAYQTW
IDQQYTKRK
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgaaaagattacttgtcaccggtgctgctggctttatcggcgctaactttgtgcattac
tggttgtcacagcatgctgatgaccgtgtggtggtgctcgatgcattaacttatgcgggc
aacctcgaaacgctgatgccgctgatggataagccgaatttccggtttgtgaaaggcaac
atcggtaacaccgaactggttgaactgctgctgcgcgaagagcagattgacaccttagtg
cattttgctgctgagtcgcatgttgaccgttcaattactgggccggatgcctttgttgaa
accaatattattggcactcacagcctgctgaaggcagcgcgtagcgtgtggttagccgat
cctgctaatccattgccacaccgttttcatcatgtgtcgaccgatgaagtctacgggact
ttgggggccaatgatccggcgtttactgagcaaactcagtatgcgccgaattcgccgtat
tccgcttccaaagcggcgtcagatcatttggtgcgcgcctatcaccacacctatggcttg
aatgtcactaccagtaattgttccaacaactacggttattatcattttcctgaaaagttg
attccgctatgtttgactaacatccttgaaggtaagccattgccaatttatggtgatggt
aagcagatacgtgattggctgttcgtagaggatcactgccgtggtattgagctggtgctg
caaaaaggtgtcactggcgaaacctataacattggcggcgtgaatgaatggcagaacatc
gatattgtcaatttgctgtgtgagttgatggatggcgagtttgctgccgatgcgtcattg
gcagagcgttatccgcaatcgccttgtgcccaaggtaaacctgccaattcgctaatcacc
tatgtaaaagatcgtgcagggcatgatcgccgttatgcgattgattgctctaaaatcgaa
cgggaacttggctttaagccagcagaaacctttgaaaccggtgtgcgcaaaaccgtgcgt
tggtatttggataaccaatcttgggtagacaacgtaaaaagcggtgcctatcaaacctgg
attgaccagcaatatactaaacgtaagtaa

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