Shewanella avicenniae: JYB87_13150
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Entry
JYB87_13150 CDS
T07845
Symbol
rfbG
Name
(GenBank) CDP-glucose 4,6-dehydratase
KO
K01709
CDP-glucose 4,6-dehydratase [EC:
4.2.1.45
]
Organism
savi
Shewanella avicenniae
Pathway
savi00520
Amino sugar and nucleotide sugar metabolism
savi00541
O-Antigen nucleotide sugar biosynthesis
savi01100
Metabolic pathways
savi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
JYB87_13150 (rfbG)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JYB87_13150 (rfbG)
Enzymes [BR:
savi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.45 CDP-glucose 4,6-dehydratase
JYB87_13150 (rfbG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QSX35511
LinkDB
All DBs
Position
complement(2967298..2968377)
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AA seq
359 aa
AA seq
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MDKAFWQGKRVFVTGHTGFKGGWLSLWLAEMGAVVRGYSLPAPTTPSLFEQAGVNQGLLS
EEGDIRDHLHLRQAMADFKPEIVFHMAAQPLVRLSYEDPVETYSTNVMGTVYVLEAIRAV
GGVKAVVNITSDKCYENREWVWGYRENEAMGGYDPYSNSKGCAELVASAYRNSFFNPKDY
AKHGVALASVRAGNVIGGGDWAKDRLIPDILKSFEQSQPVVIRNPHSIRPWQHVLEPLSG
YILIAQQLYLHGCEFAEGWNFGPNDNDAKPVEYIVNKMTQLWGDDATWQLDGAEHPHEAH
YLKLDCSKAKMRLNWQPQWDLDATLARIVRWHKAWLANENMREVTLREIRDYMSAAGIN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
attgataaagcattttggcagggcaaacgcgtttttgtcaccggacataccgggtttaaa
ggcggttggttgtcactgtggttagcagagatgggagcagtggtgcgtggctattcgttg
ccagcgccaacaacaccgagcttatttgaacaagctggtgttaatcaaggtttattatct
gaggaaggtgatatccgtgatcacctacatctgcgccaagcgatggcagattttaagcct
gaaatcgtatttcacatggccgcacagccattggtacgcctatcttacgaagacccagta
gaaacctactcaaccaacgtgatgggcaccgtctatgtgcttgaggccattcgagccgtc
ggcggcgttaaagccgtggtgaatatcaccagcgacaagtgctatgaaaaccgtgaatgg
gtttggggctatcgtgaaaacgaagcgatgggcggttacgatccttattcaaacagtaag
ggctgtgcagagctcgtggcatcggcttaccgtaactccttttttaacccaaaagattat
gccaaacatggcgttgcgttggcgtccgtgcgcgccggtaacgtgattggtggtggtgac
tgggcaaaagaccgtttaatcccagatattctgaagtcatttgagcaatctcaaccggta
gttattcgcaatccgcactccattcgcccgtggcaacacgtgttggaaccgctttctggg
tacatcttgattgcccagcaactgtacctgcatggttgtgaatttgcggaaggctggaac
tttggtccaaatgacaacgatgctaaaccggttgagtacattgttaataaaatgacccag
ctctggggggatgacgctacatggcaactcgacggtgcggaacacccccatgaagcgcac
tacttaaaactggattgctccaaagctaaaatgcgccttaattggcagccgcagtgggat
ttagacgccaccttagcgcgcatcgttcgttggcacaaagcatggctggccaatgaaaac
atgcgtgaggtgacgttgcgcgaaatccgcgattacatgagtgccgcgggaattaactaa
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