Shewanella avicenniae: JYB87_13525
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Entry
JYB87_13525 CDS
T07845
Symbol
gndA
Name
(GenBank) NADP-dependent phosphogluconate dehydrogenase
KO
K00033
6-phosphogluconate dehydrogenase [EC:
1.1.1.44
1.1.1.343
]
Organism
savi
Shewanella avicenniae
Pathway
savi00030
Pentose phosphate pathway
savi00480
Glutathione metabolism
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
savi01120
Microbial metabolism in diverse environments
savi01200
Carbon metabolism
Module
savi_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
savi_M00006
Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
JYB87_13525 (gndA)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JYB87_13525 (gndA)
Enzymes [BR:
savi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.44 phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating)
JYB87_13525 (gndA)
1.1.1.343 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating)
JYB87_13525 (gndA)
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Motif
Pfam:
6PGD
NAD_binding_2
3HCDH_N
F420_oxidored
KARI_N
UDPG_MGDP_dh_N
TrkA_N
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_11
Motif
Other DBs
NCBI-ProteinID:
QSX32757
UniProt:
A0ABX7QMS7
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Position
complement(3041739..3043268)
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AA seq
509 aa
AA seq
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MKSKFEAADIGVIGLGVMGKNLALNIVDNGFSVAAFDLDKAKVEAAEHQAATEVAGREQR
LFGVESLAEILASVKAPRVFLLSVPAGRAVDSICDALIEAGAIAEDIVIDTGNSLWTDTV
AREKHYQGKLTFFSSAVSGGEVGARFGPSLMPSGDKAAWDRIAPIFTAIAAKVDNETGKP
LERHQPGDVIEQGEPCTAYIGPAGSGHYVKMVHNGIEYADMQLICETFHFMQTGLGMSTV
QIAEVFERWNKGVLNSYLIEISAEVLRQVDPQTEKPLVEIILDKAGQKGTGLWTAVSSLQ
LGCPASTIAEAVYARSMSTQKDLRLQLASSLKGPAIAPVSAEEQQQTIDALEAALYCAKV
TAYAQGFQMIAMQAKEQHWELDYAAIARIWRAGCIIRAGFLSTISDAFEANDNLSNLLLA
EGFASKLNELQGQWRQVVAQAVIKGIPVPCISSALAYFDSLRCEVLPANLLQGQRDFFGS
HTFERVDAPKGEFYHITWSESPRKLVKIN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaagtttgaagcagcagatatcggtgtgatcggtctgggcgttatgggtaaa
aatctcgcgcttaatatcgttgataatggtttttctgttgctgcgtttgaccttgataag
gccaaagttgaagcagccgaacatcaagctgcaactgaagttgccggccgtgagcaacgt
ctattcggcgttgaatctttggcggaaatccttgccagcgttaaagcgccgcgcgtcttc
ttgttatcagtgccagcgggtcgagcggtcgacagcatttgtgatgctttgattgaagcc
ggcgcgattgctgaagatatcgtgatcgataccggtaacagcttgtggacggacaccgtc
gcgcgcgaaaaacattaccaaggcaagttgaccttctttagctcagcagtatccggtggt
gaagtcggcgcacgttttggaccttcattgatgccgagtggcgataaagccgcgtgggat
cgtatcgcaccaatctttactgccattgctgccaaagttgacaacgaaactggtaagcca
ttagagcgccatcagccaggtgatgtaattgaacaaggtgaaccttgtaccgcttacatc
ggcccagcaggctcaggtcactacgtaaaaatggtgcacaacggtattgaatacgccgat
atgcagctgatctgcgaaaccttccactttatgcaaaccggtctgggcatgagcacagtg
cagattgccgaagtgtttgaacgctggaataaaggcgtgctgaacagctatctgattgag
atcagtgctgaagtgttgcgccaagttgaccctcaaaccgaaaaaccactggttgagatt
attctcgataaagccggtcaaaaaggtactggcctgtggactgcggtgagcagtttgcaa
ctgggttgcccagcgtcaacgattgctgaagctgtgtatgcgcgttcaatgagcactcaa
aaagatctgcgtttgcaattggcctcttcattgaaaggccctgcgattgcgccggtatca
gcggaagaacaacagcaaaccatcgatgccttagaagcggccttgtactgtgcgaaagtg
accgcttacgcgcaaggcttccaaatgattgctatgcaagccaaagagcaacactgggag
ttggattacgcggccattgcccgcatctggcgcgcaggttgtatcattcgtgctggcttc
ctcagtaccatcagtgatgcgtttgaagcgaacgataacctgagcaacttgttgttggcc
gagggttttgcttctaagttgaacgaactgcaaggtcaatggcgccaagtggttgcccaa
gcggtgatcaagggtattccggttccttgcatcagctcagcgttggcgtattttgattcg
ctgcgttgtgaagtgttacctgccaacctgctgcaaggtcaacgtgatttctttggttca
cacacctttgaacgggttgatgcacctaaaggcgagttctaccacatcacgtggagtgaa
tcgccacgtaagttggtgaaaatcaactaa
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