Shewanella avicenniae: JYB87_13555
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Entry
JYB87_13555 CDS
T07845
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
savi
Shewanella avicenniae
Pathway
savi00280
Valine, leucine and isoleucine degradation
savi01100
Metabolic pathways
Module
savi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JYB87_13555
Enzymes [BR:
savi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
JYB87_13555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
RimK
ATPgrasp_ST
ATP-grasp_3
DUF7445
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QSX32763
LinkDB
All DBs
Position
3049735..3051789
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AA seq
684 aa
AA seq
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MTERRINSLLIANRGEIACRIIQTCHKLGIRAVAIFSEVDSHARHVTLADSAFLVEGATP
VAAYLNVERIIEIAQQCGADAIHPGYGFLSENAAFANACNAVGIIFVGPPASAIAAMGSK
SAAKTIMQQAGVPLIPGYHGSEQTPTALMAQASTIGFPLLIKAAFGGGGKGMRIVEQEAQ
FMAQLEAAKREAKAAFGDDSMLLEKYIQQPRHIEVQVFADQHGQCIYLGDRDCSLQRRHQ
KVIEEAPAPNLTDATRQAMGQAAVAAAQAIDYVGAGTIEFLLDAQQQFYFMEMNTRLQVE
HPVTEMVTGVDLVAWQLQIAMGQPLPLTQTEVTITGHAFEARIYAEDPLHQFLPASGKLY
ELQPPQPSATIRIDSGVQAGDIITPYYDPMIAKLIVHQPDRQQALSSLVLALQQYVIAGV
KHNIDFLRRLAAHSEFAGTHFSTHFIEQHQAELLAPAVDDKIVALAAIGCLLRNQQQQTL
PQTLAGFRLNAAATWQQYLAAEEWEPAGDQTAPSWITLQQATADAYQLELGNKRFLVSGE
FNAATGQLYAMLNGEVLSCHLFWQQTRLYLCHQGQTVEFQTAAPTIQQDNSAQHSFCAPM
NGTIVTQLVAPGEAVKAGQGLLVMEAMKMEYQLNAPTAGSVSAFCFTAGALVSEGDLLLH
FSAEDADADTYSDTDADTNITEAD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcgtcgcatcaacagcctgttgattgctaatcggggcgaaattgcctgccga
attattcaaacctgccacaaactgggaattcgtgccgtcgcaattttttcagaagtggat
agccacgcccgccatgtcacgctggccgatagtgcttttctggtggaaggcgccacgcct
gtggccgcctatctcaatgtcgagcggattatcgaaatcgctcagcaatgcggtgctgat
gcgattcatcctggctatggatttctgtcagaaaatgcagccttcgccaatgcatgcaac
gcggtaggcattatctttgttggcccaccggccagtgccattgcagccatgggcagtaaa
agtgccgccaaaactattatgcagcaagcgggtgtgccgctgatacccggctatcacgga
agtgagcaaacaccaaccgcgttgatggcgcaggccagcactatcggctttccactgttg
atcaaagcggcatttggcggtggcggcaaagggatgcgtattgttgagcaagaagcgcaa
tttatggcgcaactggaagcggccaaacgtgaagccaaagccgcctttggcgatgacagt
atgctgctggaaaaatatattcagcaaccgcggcatattgaagtgcaggtttttgccgac
cagcatggccagtgcatttaccttggcgatcgcgactgttcattacagcgacgtcaccaa
aaagtgattgaagaagcgcccgcccccaacctaaccgatgccacccgccaagcgatgggg
caagcggcagtcgcagccgcgcaagcgattgattatgtcggcgcaggtaccattgagttt
ctgctcgatgcgcaacaacaattttattttatggagatgaacacccgattgcaggtggag
catcccgtcaccgagatggtgaccggcgttgatttggtagcgtggcaactgcagattgcc
atggggcaaccgttaccgctaacacaaactgaagtgactattaccggtcatgcatttgaa
gcgcggatctacgccgaagatccactgcatcagtttttacctgcatcaggcaagctgtat
gagctgcaaccacctcagccatcagcaaccatccgcatcgattctggcgtgcaagcgggc
gatataatcaccccgtattacgatcctatgattgccaaattgatcgtccaccagcccgat
cgtcaacaagcgcttagcagcttagtgctggcattgcagcaatatgtcatcgcgggtgtt
aaacacaatatcgattttttgcggcggctggcggcacatagcgagtttgcgggtactcac
tttagcacccatttcattgagcaacatcaagccgaactgcttgcccctgcggtagatgac
aagattgtcgcactggcggctattggctgtctgctacgcaatcaacagcaacaaacattg
ccgcaaacactggcggggttcaggttaaacgctgcagccacatggcaacaatatttagcg
gcagaagagtgggaaccagctggcgatcaaacagcgccaagctggataacgcttcagcaa
gctactgctgacgcttaccagcttgagctcggcaataaacgctttctggttagtggtgaa
ttcaacgcagcaacgggtcaactgtatgcgatgctcaacggcgaggtattaagttgtcat
ctgttttggcagcaaacacggctctatctttgccatcaaggccaaaccgttgaattccaa
accgccgcaccaacgattcaacaagacaacagcgcacaacacagtttttgcgcgccgatg
aatggcaccattgtgactcagctagtcgcccccggtgaagccgtaaaagcaggccaaggg
ctgctggtgatggaagcgatgaagatggaatatcagctcaacgcaccaaccgcaggctcg
gttagcgccttttgttttacagctggcgcgttagttagcgagggcgatttactgctgcat
ttttcggctgaagatgctgatgctgatacttattctgatactgacgccgacacgaatatt
acggaggctgactaa
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