Shewanella avicenniae: JYB87_13740
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Entry
JYB87_13740 CDS
T07845
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
savi
Shewanella avicenniae
Pathway
savi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYB87_13740
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
savi01007
]
JYB87_13740
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
savi03016
]
JYB87_13740
Enzymes [BR:
savi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
JYB87_13740
Amino acid related enzymes [BR:
savi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JYB87_13740
Transfer RNA biogenesis [BR:
savi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JYB87_13740
Prokaryotic type
JYB87_13740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR_2
TIR
Motif
Other DBs
NCBI-ProteinID:
QSX32798
UniProt:
A0ABX7QQ07
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All DBs
Position
3092589..3094301
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AA seq
570 aa
AA seq
DB search
MRISQYLLSTQKETPANAEVISHQLMLRAGMIRRNAAGLYSWLPTGLRVLRKVEAIVRDE
MEKAGAIEILMPMVQPGDLWVESGRWDKFGPELLRFVDRNNRDFVLGPTHEEVITDLVRK
EISSYKQLPLTLYQIQTKFRDEVRPRFGVMRAREFLMKDGYSFHLDKETLDATYQAMYQA
YSNILSRLGLEFRPVLADTGSIGGSMSHEFHVLAQSGEDLLAYSTGSDYAANIEKAEAPL
PTTERATPTQEMSLVDTPNAKTIEELVEQFGLAIEKTVKTLIVLGDTEEAPLVALLVRGD
HELNETKADKIPGVLSPLEFATEEEIRAAIGAGPGSLGPVGLNMPVYIDHAVAVMSDFGA
GANQDGKHYFGINWDRDVAAPQAYDIRNVIEGEPTPDGKGTYAFARGIEVGHIFQLGTRY
SQAMNATVLDENGKAQTLQMGCYGVGVSRIVAAAIEQNHDDRGIIWPDAIAPFKVGILPM
NMHKSHRVTDIAEKLYKDLNDAGIEVMFDDRKERPGVMFADMELVGIPHTIVIGDRNIDS
GVFEYKNRRTGEKQDIPMDQIVEFIKNAVC
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattagccaatacctgctatcaacacagaaagaaacccctgccaacgcagaagtt
atcagtcatcaacttatgctgcgcgccggtatgatccgtcgtaacgctgctggtctttac
agctggttgccgaccggcttgcgtgtactgcgcaaagtagaagccattgtccgcgacgaa
atggaaaaagcgggcgcgattgaaattcttatgccgatggtacaaccgggtgatttgtgg
gttgaatcaggccgttgggataaatttggtccagaactgctgcgttttgttgaccgcaac
aaccgtgactttgtacttggcccaacccatgaagaagtgatcactgacttagtccgtaaa
gagatcagctcttacaagcagttaccattgaccctgtaccaaatccaaaccaaattccgt
gatgaagtacgcccacgttttggtgttatgcgcgcccgtgaattcctgatgaaagatggc
tactcattccatctggacaaggaaacactagatgccacttatcaagcgatgtaccaagcg
tattccaatattctgagccgtcttggtttggaattccgcccagtattggccgataccggc
tcaatcggcggtagcatgtcacacgaattccacgtattagcacaaagcggtgaagacttg
ctggcttactcaactggcagcgattatgccgctaacatcgagaaagctgaagcgccactg
ccaactactgaacgtgcaacgccaacccaagagatgagcttagtggacacgccaaacgca
aaaaccatcgaagagttggttgaacagttcggtctggcgattgaaaaaaccgttaaaact
ctgattgtacttggcgatactgaagaagcgccattagtggcactgttggtacgtggcgat
cacgaactgaacgaaactaaagcagacaaaattccaggtgtgttatcaccgctggaattt
gctactgaagaagaaatccgcgcagccatcggcgctggccctggttcattaggcccagtg
ggcttgaacatgccggtgtatatcgaccatgcagttgccgtaatgagcgacttcggcgcg
ggtgctaaccaagatggtaaacactatttcggcatcaactgggatcgcgatgttgccgcg
ccacaagcatacgatatccgtaacgtgattgaaggcgaaccaacgccagatggtaaaggc
acttacgctttcgctcgcggtattgaagtcggccatatcttccaactgggcacccgctat
tcacaagcgatgaacgccacagtattggatgaaaacggtaaagcgcaaactctgcaaatg
ggttgttatggcgtgggcgtcagccgtatcgtggcagcggctatcgaacagaaccacgat
gatcgcggcatcatttggccggacgcgattgcgccgttcaaagtgggcattttgccaatg
aacatgcacaaatcacatcgcgtgaccgatattgctgaaaagctttataaagacttgaac
gacgccggcatcgaagtaatgtttgatgatcgtaaagagcgcccaggcgtgatgttcgcc
gatatggaactggtcggcattccacacactatcgtgattggtgaccgcaacatcgacagc
ggcgtatttgaatacaaaaatcgtcgcaccggtgaaaaacaagatatcccaatggatcaa
atcgttgagttcattaaaaacgcagtgtgctaa
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