Shewanella avicenniae: JYB87_13850
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Entry
JYB87_13850 CDS
T07845
Name
(GenBank) MacB family efflux pump subunit
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
savi
Shewanella avicenniae
Pathway
savi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB87_13850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_13850
Transporters [BR:
savi02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
JYB87_13850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
SMC_N
AAA_16
AAA_21
ABC2_membrane_3
AAA_29
RsgA_GTPase
AAA_22
MMR_HSR1
AAA_23
nSTAND1
nSTAND3
AAA_25
AAA_24
DUF87
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QSX32820
LinkDB
All DBs
Position
3119469..3121412
Genome browser
AA seq
647 aa
AA seq
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MSKPLLEVSGVYRSFPAGEQQLTVLHDINLTIERGEMVAIVGQSGSGKSTLMNILGCLDK
PSEGTYFINGQDTSKMEADELAELRREYFGFIFQRYHLLGDLTAVGNAEVPAIYAGKARE
QRHVRAEQLLTRLGLGDRLDHKPSQLSGGQQQRVSVARALMNGGDVILADEPTGALDSHS
GEEMMRLLQELHQDGHTIIIVTHDMQVAQYSDRIIEIKDGVIFADRRNKPSPQPKTIPNH
SAKPRNLLAHWDNFSEALKMALLAMTSHRLRTFLTMLGIIIGIASVVSVVALGEGSQRQI
LQNISSMGTNTIDVRPGSGFGDRRSGRIRTLTASDAEALKNLPFVDSVTPSINTSVTIRY
GNQAKSASVSGVGPDFFRVRGYELAAGQYWDEQSVDSLAQEAVIDDNTKRELFPDSNPIG
AVIFLGSLPVRIIGVTEKKQSAFGNNDALTVWVPFTTVGGRMMGQHYLGSISVRIDQDAP
SAAAEQGIISLLKMRHGTEDFFTINTDTIRQNIEKTTATMTLLISAIAVISLVVGGIGVM
NIMLVSVTERTREIGVRMAVGARQGDILRQFLIEAILVCLCGGILGISLSFLIGFGFSSA
SSNFQMIYSTNSIIAAFACSTLIGVLFGFLPARNAARLDPVDALARE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccttactcgaagtcagtggtgtgtatcgctcatttcctgcgggcgagcag
caactgacggtactgcacgatatcaatctcaccattgagcgtggtgagatggtggcaatt
gttggtcaatctggttccggcaaatccaccttgatgaatattttaggctgcctcgataag
ccgtctgagggcacctattttatcaacggccaagatacctcgaagatggaagccgatgag
ctggctgaactacgtcgcgaatactttggctttatctttcaacgctatcatctgctcggt
gatttaaccgccgttggcaatgccgaagtaccggcaatttatgcaggcaaagcccgcgag
caacgtcatgtgcgcgctgagcaactgttaacacgcttaggtttaggtgaccggcttgac
cacaaacctagccagttaagtggtgggcaacaacagcgggtgagtgtggcgcgggcgctg
atgaatggcggcgatgtgattctggccgacgaaccgaccggcgcactcgacagccacagc
ggtgaagagatgatgcgcttgctacaagagcttcatcaagatggtcacaccatcattatc
gtgacccacgatatgcaagtcgcgcaatactccgaccgcattatcgaaatcaaagatggg
gtgatttttgccgatcggcgcaataagccatcgcctcaacccaagaccattccaaaccac
agcgccaaacctcgtaatctattggcgcattgggataacttttcagaagcgctgaagatg
gcgttgctggcgatgacctcgcaccgtttgcgtacctttctcaccatgctcggcatcatt
attggtatcgcctcggtggtctcagtcgtggcgctcggtgaaggctcacaacggcaaatt
ttgcaaaacatcagctcaatgggcaccaacaccattgatgttcgccccggcagtggcttt
ggtgatcgacgttcaggccgtattcgcaccttaaccgccagtgacgctgaagcactgaaa
aacttgccatttgtggacagcgttacgccatctattaataccagcgtcaccattcgctat
ggcaaccaagcaaaaagcgcctcggtcagtggtgtcggcccagactttttccgcgtacgc
ggttatgagttggccgctggtcaatattgggatgaacaaagcgtagattcactggcgcaa
gaagcggtgatcgacgacaacaccaaacgcgagctgtttcccgacagcaacccgattggt
gcggtgattttcctcggcagtttgccggtgcggattattggggtcaccgagaagaagcaa
agcgcctttggaaataacgacgcgctcaccgtttgggtgccgtttaccaccgttggcggt
cgcatgatggggcagcattatcttggcagcatctctgtacggattgaccaagacgcgccg
agcgccgccgctgagcaagggattatcagcttgctgaagatgcgtcatggcaccgaagac
ttcttcaccatcaacaccgataccattcggcaaaatattgagaaaaccaccgcgacgatg
acgctgttgatttccgctattgcggtgatctcgttggtggtgggcggtatcggcgtgatg
aacatcatgttggtgtcggtcaccgaacgcacacgcgaaatcggggtacggatggcagtg
ggcgctcgccaaggcgatatcttgcggcagttcttaatcgaggcaatcttggtgtgtctc
tgcggcgggattttagggatcagtctgtcatttttgattggctttggtttctcatctgcc
agcagtaatttccagatgatctactccaccaattccattattgccgcgtttgcctgctca
actttaattggggtgctatttggcttcttgcctgcgcgcaatgccgctcgccttgaccct
gttgatgctttggccagagagtaa
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