Shewanella avicenniae: JYB87_14210
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Entry
JYB87_14210 CDS
T07845
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
savi03400
]
JYB87_14210 (radA)
DNA repair and recombination proteins [BR:
savi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JYB87_14210 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
GvpD_P-loop
Rad51
AAA_22
SLFN-g3_helicase
DUF7125
RecA
ABC_tran
DUF1258
AAA
AAA_14
zf-LYAR
AAA_24
AAA_16
AAA_29
Viral_helicase1
KdpD
Zeta_toxin
NTPase_1
cobW
nSTAND3
DZR
Motif
Other DBs
NCBI-ProteinID:
QSX32884
LinkDB
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Position
complement(3202279..3203646)
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AA seq
455 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACQEWNTITEVRLGAVTAVKSSNFSGYAGSSGGSV
QTLDQIDLNEVPRIATGFVEFDRVLGGGIVAGSAILIGGHPGAGKSTLLLQTLCGLAQTM
PALYVTGEESLQQVAMRAHRLSLPTDKLKMLSETSVDVICEIALREQPKIIVIDSIQVMH
ISDVQSSPGSVAQVRESAAFLTRFAKQNGIAIIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTEKGLREVANPSAIFLSRADEAAPGSVVMVV
WEGTRPLLVELQVLVDQSMAGHPRRIAVGTDANRLAMLLAVLHRHGGLQMSDQDVFVNVV
GGVKVSETSADLTLLLSMVSSFRSIVLPRDLVVFGEVGLSGEIRPVPNGTERLIEAAKHG
FTRAIVPKANVPKKAPAGMEVVGVAKLSEALDALV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaataaaacagcatatgtctgcaatgaatgtggacaagatttccctcgttgg
caagggcaatgcagcgcatgccaagaatggaacacgattaccgaagtgcgcttgggggct
gtgaccgccgtcaaaagcagtaacttcagcggctatgcaggttcttcaggtggcagtgtg
cagaccttagatcagattgatctaaacgaggtgccacgcattgcgaccggctttgttgag
tttgaccgtgtgctaggcggtggcattgtcgcgggcagtgcgatcttgattggtggtcat
cccggcgccggtaaaagtactttgctgttgcaaaccctgtgtggcttggcgcaaaccatg
ccagcactttacgttaccggggaagaatcgctgcagcaagtggcgatgcgggctcatcgc
cttagcttgccgacggataaactcaagatgctgtcggaaaccagtgttgatgtgatttgc
gaaatcgcgttacgtgaacaaccaaaaatcatcgtcatcgattctattcaggtgatgcat
atcagcgatgtgcaatcttcgccgggcagcgtggcgcaggtgcgtgagtctgcggcgttt
ctgactcgctttgcgaaacaaaatggcatcgccattattatggtcggacacgttaccaaa
gacggtagtctggcgggtccaaaggtacttgagcactgtattgactgctcagtaatgttt
gaaggggatagcgacagccgctatcgtaccctgcgttcgcataaaaaccgctttggcgcc
atcaatgagctcggtgtgtttgccatgaccgaaaagggcttacgtgaagtcgccaatccc
tcggcaattttcttgtcgcgtgcagatgaagcggcgcctggttcagtggtgatggtggtg
tgggaaggcacgcggccacttttggtcgagctgcaagtgttggtcgatcagtcgatggct
ggccatcctcggcgaatcgcggtgggcacggacgcaaaccgtctggcaatgttacttgcg
gtgttgcatcgtcatggtggcttgcagatgtcggatcaagatgtgtttgtcaacgtggtt
ggtggggtcaaagtgtctgaaaccagcgccgatttaaccttgctactgtcgatggtatcg
agtttccgctcaattgtattgccccgcgatctggtggtgtttggtgaggtagggttatcg
ggtgaaattcgcccggtaccgaatggcactgagcgtttgattgaggcggcgaaacacggc
tttacccgggctattgtgcccaaagctaacgtgccaaagaaagcgcctgccggaatggaa
gtggttggcgttgccaaactcagcgaagcgctagatgctttggtttaa
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