Shewanella avicenniae: JYB87_14565
Help
Entry
JYB87_14565 CDS
T07845
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
savi
Shewanella avicenniae
Pathway
savi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYB87_14565 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
savi03019
]
JYB87_14565 (groL)
03110 Chaperones and folding catalysts [BR:
savi03110
]
JYB87_14565 (groL)
03029 Mitochondrial biogenesis [BR:
savi03029
]
JYB87_14565 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
savi04147
]
JYB87_14565 (groL)
Enzymes [BR:
savi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JYB87_14565 (groL)
Messenger RNA biogenesis [BR:
savi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JYB87_14565 (groL)
Chaperones and folding catalysts [BR:
savi03110
]
Heat shock proteins
HSP60 / Chaperonin
JYB87_14565 (groL)
Mitochondrial biogenesis [BR:
savi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JYB87_14565 (groL)
Exosome [BR:
savi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JYB87_14565 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JYB87_14565 (groL)
Exosomal proteins of breast cancer cells
JYB87_14565 (groL)
Exosomal proteins of colorectal cancer cells
JYB87_14565 (groL)
Exosomal proteins of bladder cancer cells
JYB87_14565 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QSX32952
LinkDB
All DBs
Position
complement(3289048..3290688)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKALSQACSDSKAIAQVGTISANSDESIGEIIANAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKAETGSVELDNPFILLVDKKINSIRELLPILEGL
AKSGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGSAKRVIITKDNTTIIDGVGEEDQIKARVEQIKQQIAESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RVASKIKDVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGEGNFGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVSELPKDEAGPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtaaaatttggtaacgacgcacgcgtaaaaatgctggcgggtgtt
aacgttttagctaacgcagttaaagtgactctgggccctaaaggccgtaacgtagttttg
gataaaagcttcggcgcaccattgatcaccaaagacggtgtttcagtagcgaaagagatc
gaactggaagacaagttcgaaaacatgggcgcacaaatggtgaaagaagttgcatcaaaa
gcaaacgatgcagcaggtgacggtaccactaccgcgaccgttctggcacaagccattgtt
aacgaaggtctgaaagcggttgccgctggcatgaacccaatggacctgaaacgcggtatc
gacaaagccgttattgcagcagttgctgaactgaaagcgctgtctcaagcctgttcagat
tcaaaagcgattgctcaagtagggactatctctgctaactctgatgaatcaatcggcgaa
atcattgctaacgcaatggaaaaagtaggcaaagaaggcgttatcaccgttgaagaaggc
caagcgctggaaaacgaactggacgtcgtagaaggtatgcagttcgaccgcggttacctg
tctccttacttcatcaacaaagcagaaactggctcagttgaactggataacccattcatc
ctgctggttgacaagaaaatcaacagcatccgtgaactgttgccaatccttgaaggtctg
gcgaaatctggccgtccactgctgatcgttgctgaagacgttgaaggcgaagcgctggca
acgctggttgtgaacaacatgcgcggtatcgtgaaagtcgctgcagttaaagcccctggt
ttcggcgaccgtcgtaaagcgatgctgcaagatatcgctatcctgactggcggtactgtt
atcgctgaagagatcggtctggaactggaaaaagccacgctggaagatctgggtagcgca
aaacgcgtgatcatcaccaaagacaacaccactatcattgacggtgttggtgaagaagac
caaatcaaagcgcgcgttgagcaaatcaaacaacaaattgctgaatcaacttcagactac
gacaaagaaaaactgcaagaacgtatggcgaaactggccggcggtgttgcggtaatcaaa
gtcggtgcagctaccgaagttgaaatgaaagagaaaaaagaccgcgttgaagacgcgctg
cacgcaactcgcgccgctgttgaagaaggcgtggttgcaggtggtggtgttgccctgatc
cgcgttgcttcaaaaatcaaagatgttgaagtggctaacgaagaccaaaaacacggtgtg
gttatcgcactgcgtgcaatggaagcaccattgcgccaaatcgcgaccaacgccggtgaa
gaagcctcagttgtggctaacactgtgaaaaacggtgaaggcaacttcggttacaacgcg
ggtaacgatacctacggcgacatgctggaaatgggtattcttgacccaactaaagtgact
cgtagcgcactgcaatttgcagcgtctatcgctggcctgatgatcaccaccgaagcgatg
gtatctgaactgccaaaagatgaagctggcccagatatgggtggcatgggcggtatgggt
ggcatgggcggcatgatgtaa
DBGET
integrated database retrieval system
