Shewanella avicenniae: JYB87_14735
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Entry
JYB87_14735 CDS
T07845
Name
(GenBank) mechanosensitive ion channel family protein
KO
K03442
small conductance mechanosensitive channel
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_14735
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_14735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
DUF1451
Med21
GNAT_acetyltran
Motif
Other DBs
NCBI-ProteinID:
QSX32982
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Position
3330116..3331723
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AA seq
535 aa
AA seq
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MYKSLLLALTLCFSSALFAAEAPATDTSSAELAQLQRAMMQSIAQIQISKGELKAVTEYR
IKAQAQALRNKLKEQLDANTLPAEQLLPLVQQQHLRLQEFVHYLDKEVAHTAGELGGDND
PALMLQLSRRSVEKAEIFRGQLELLNWEDKLNANTESPRQTLQQQIQQQANELQSLVAYN
QQQIAELVDDINGAGKDASSEQRAQLSILKERLGNNSTALSTDITLLDALGTDTIALKQS
LFSVSGDITQDVFNVSFISQLLQNWLAVAESGIVDNGPNLMFKLFIFLVILFCAQLLAKL
AERIVRKAVSNSKLNFSMLLQDFFTGLSGKVVMTIGLLIALSQLGFELGPLLAGFGIAGV
IIGFALQDTLSNFASGMMILIYRPYDVGDLINAAGVTGRVSHMSLVSTTIKTLDNQRLIV
PNNKIWGDTINNITAEHHRRVDMTFGIGYSDDIEKAERVLQEIVSNHPKVLQDPEPRVKL
HLLNDSSVDFIVRPWVAPDDYWDVYWDITRAVKMRFDEENITIPFPQRDVHLHRK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaatcacttctattggcgctgacgctctgttttagcagcgcactgtttgcggct
gaagcaccggctacagataccagcagcgccgaattagcccaactgcaacgggcgatgatg
cagagcattgctcaaatccaaatcagcaaaggcgaactgaaagcggtcactgaataccgc
atcaaggcgcaggcacaagcgctgcgcaataagctgaaggagcagctagatgccaacacc
ctgcctgcggaacaactgttgccgctggtacagcagcaacatctacgtttgcaggagttt
gtgcattatctcgataaagaagtcgcccatacagcgggtgagcttggcggcgacaatgac
cctgcgttgatgctgcagttgtcgcgccgtagcgtggaaaaagccgagatctttcgggga
caattggagctgctgaactgggaagataagctcaatgccaacacagaatcaccacgccaa
accttgcaacagcagatccagcagcaagccaatgaactgcaaagtttagtggcctataac
cagcagcagatagccgaactggtggacgatatcaatggcgcaggtaaagatgccagcagc
gagcaacgggcgcagctgagtattctcaaagagcgtttaggcaacaacagcacggcattg
agtacagatatcaccctgctggatgcgctcggtaccgataccattgcgttaaagcagagc
ctattttcagtctctggcgacatcacacaagacgtgtttaacgtcagctttatttcgcag
ctgttgcaaaactggctcgctgtagcagaaagcggcatcgtcgataacggcccgaacctg
atgtttaagctgtttatcttcctggtgattttgttctgtgcccagttgctcgccaaactg
gctgagcggatagtgcgtaaagcggtaagcaactctaagctcaatttcagcatgctgctg
caagacttctttaccggactttcgggcaaggtggtgatgaccatcggcctgctgatcgcc
ctgtcgcaacttggctttgagctggggccattgctggctggtttcggtatcgcgggtgtg
attatcggttttgcgctgcaagataccttgtcgaacttcgcctcggggatgatgattttg
atctatcgcccgtacgatgtgggcgacctgataaacgctgctggggtgactggacgcgtg
agccatatgagcttagtgtctaccactattaagaccttggataaccaacgtttaatcgtg
ccgaataataagatttggggcgataccatcaacaacattaccgccgagcatcatcgccga
gtggatatgacctttggcattggttatagcgacgatattgaaaaggctgagcgcgtgctg
caagagattgtcagcaaccatccgaaagtgctgcaagacccagaaccaagggtaaaactg
catctgctcaacgactcatcggtcgactttatcgtacgcccgtgggtggcacccgatgat
tattgggatgtgtattgggatattactcgcgcagtgaaaatgcgctttgatgaagagaac
atcactattccgttcccgcagcgcgatgtgcatttgcatcgcaaataa
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